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BaseInfo

ncRNA ID	novel_zma_miR12047
Species	Zea mays
Class	miRNA
Genome position	Chr1:231201097-231201146 [+]
Reference genome	RefGen_v4
Source	SRR5100255
Length	24
Mature sequence(if miRNA)	1 - CAACAACAGUGCCAUAUUAGGAUG - 24
Stem-loop(if miRNA)	----CAA    A    C        A        CAAC GUGC AUAUUAGG U        |||| |||| |||||||| G        GUUG CGCG UGUAGUCC U GGGUCUG    A    -        U
Stem-loop sequence	CAACAACAGUGCCAUAUUAGGAUGUUCCUGAUGUGCGCAGUUGGUCUGGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EZ106785.1	ncRNA:24   GUAGGAUUAUACCGUGACAACAAC   1   |||||||||||||||||||||||| targets:32   CAUCCUAAUAUGGCACUGUUGUUG   55 Target Full Sequence	0.0	TSA: Zea mays contig42443, mRNA sequence	NA	coding protein	psRNATarget
XM_020552975.1	ncRNA:24   GUAGGAUUAUACCGUGACAACAAC   1   |||||||||||||||||||||||| targets:2752   CAUCCUAAUAUGGCACUGUUGUUG   2775 Target Full Sequence	0.0	PREDICTED: Zea mays hypothetical protein (cl23538_1a), transcript variant X3, mRNA	NA	coding protein	psRNATarget
EZ064540.1	ncRNA:24   GUAGGAUUAUACCGUGACAACAAC   1   ||||||||||||||=||||||||| targets:33   CAUCCUAAUAUGGCGCUGUUGUUG   56 Target Full Sequence	1.5	TSA: Zea mays contig00172, mRNA sequence	NA	coding protein	psRNATarget