ncRNA ID | novel_zma_miR12044 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:228558536-228558635 [+] |
Reference genome | RefGen_v4 |
Source | SRR5100255 |
Length | 24 |
Mature sequence(if miRNA) | 1 - ACGUACGUACUCCCUCCGUUUCUU - 24 |
Stem-loop(if miRNA) |
--AC                                           CAA     GUACGUACUCCCUCCGUUUCUUUUUAUUUGUCGCUGGAUAGUG   A     |||||||||||||||||||||||||||||||||||||||||||     CAUGCAUGAGGGAGGCAAAGAAAAAUAAACAGCGACCUAUCAC   A UCAU                                           AUU |
Stem-loop sequence | ACGUACGUACUCCCUCCGUUUCUUUUUAUUUGUCGCUGGAUAGUGCAAAAUUACACUAUCCAGCGACAAAUAAAAAGAAACGGAGGGAGUACGUACUACU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_020542418.1 |
|
2.5 | PREDICTED: Zea mays protein NRT1/ PTR FAMILY 8.1 (LOC103636396), transcript variant X3, mRNA | NA | coding protein | psRNATarget | |||||||||
XM_008658752.2 |
|
2.5 | PREDICTED: Zea mays protein NRT1/ PTR FAMILY 8.1 (LOC103636396), transcript variant X1, mRNA | NA | coding protein | psRNATarget |