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BaseInfo

ncRNA ID	novel_zma_miR12040
Species	Zea mays
Class	miRNA
Genome position	Chr1:220373432-220373533 [+]
Reference genome	RefGen_v4
Source	SRR5100255
Length	23
Mature sequence(if miRNA)	1 - GCACAGGACAAUGAAUAGUAACC - 23
Stem-loop(if miRNA)	--    A     A           CU       GCACCAAC   UAG  CUUCCAG   GCAC GGACA UGAAUAGUAAC  GUCUGGU        GGC   CU       A   |||| ||||| |||||||||||  |||||||        |||   ||   CGUG CCUGU ACUUGUCAUUG  UAGACUA        CCG   UC       G CG    G     C           CC       -------A   ---  AAAGGAA
Stem-loop sequence	GCACAGGACAAUGAAUAGUAACCUGUCUGGUGCACCAACGGCUAGCUCUUCCAGAGAAGGAAACUGCCAAUCAGAUCCGUUACUGUUCACUGUCCGGUGCGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AY108692.1	ncRNA:23   CCAAUGAUAAGUAACAGGACACG   1   *|||||||||||*|||||||||| targets:171   AGUUACUAUUCACUGUCCUGUGC   193 Target Full Sequence	1.5	Zea mays PCO083146 mRNA sequence	NA	coding protein	psRNATarget
AY108692.1	ncRNA:23   CCAAUGAUAAGUAACAGGACACG   1   |||*||||||||*|||||||||| targets:202   GGUCACUAUUCACUGUCCUGUGC   224 Target Full Sequence	1.5	Zea mays PCO083146 mRNA sequence	NA	coding protein	psRNATarget
AY108692.1	ncRNA:23   CCAAUGAUAAGUAACAGGACACG   1   *|*|||||||||*|||||||||| targets:75   AGCUACUAUUCACUGUCCUGUGC   97 Target Full Sequence	1.5	Zea mays PCO083146 mRNA sequence	NA	coding protein	psRNATarget
AY108692.1	ncRNA:23   CCAAUGAUAAGUAACAGGACACG   1   *|*|||||||||*|||||||||| targets:107   UGCUACUAUUCACUGUCCUGUGC   129 Target Full Sequence	1.5	Zea mays PCO083146 mRNA sequence	NA	coding protein	psRNATarget
AY108692.1	ncRNA:23   CCAAUGAUAAGUAACAGGACACG   1   *|*|||||||||*|||||||||| targets:232   AGCUACUAUUCACUGUCCUGUGC   254 Target Full Sequence	1.5	Zea mays PCO083146 mRNA sequence	NA	coding protein	psRNATarget