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BaseInfo

ncRNA ID novel_zma_miR12034
Species Zea mays
Class miRNA
Genome position Chr1:206470300-206470355 [+]
Reference genome RefGen_v4
Source SRR5100255
Length 24
Mature sequence(if miRNA) 33 - ACACUCGGUAAAGAAGCUCUUUGC - 56
Stem-loop(if miRNA) -A   U    -               UA
  AAA AGCU CUUUGCCGAGUGUUA  U
  ||| |||| |||||||||||||||
  UUU UCGA GAAAUGGCUCACAGU  A
CG   C    A               UU
Stem-loop sequence AAAAUAGCUCUUUGCCGAGUGUUAUAUAUUUGACACUCGGUAAAGAAGCUCUUUGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008658185.2
ncRNA:24   CGUUUCUCGAAGAAAUGGCUCACA   1
  |=|||||||||*||||||||||||
targets:1666   GUAAAGAGCUUGUUUACCGAGUGU   1689

1.5 PREDICTED: Zea mays putative F-box/LRR-repeat protein At3g58880 (LOC103635804), mRNA NA coding protein psRNATarget