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BaseInfo

ncRNA ID	novel_zma_miR12032
Species	Zea mays
Class	miRNA
Genome position	Chr1:204676333-204676399 [+]
Reference genome	RefGen_v4
Source	SRR5100255
Length	23
Mature sequence(if miRNA)	45 - GAGAACCGUGCCGUGCUUGGGCU - 67
Stem-loop(if miRNA)	--   G         - C    AAUA            CCC AAGCACGGC C GUUU    GUACCGGGCC   ||| ||||||||| | ||||    |||||||||C   GGG UUCGUGCCG G CAAG    CAUGGCUCGG UC   -         U C    --AG
Stem-loop sequence	CCCGAAGCACGGCCCGUUUAAUAGUACCGGGCCCGGCUCGGUACGAGAACCGUGCCGUGCUUGGGCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT017944.1	ncRNA:23   UCGGGUUCGUGCCGUGCCAAGAG   1   *|=||=||||||||||*|||||| targets:306   UGUCCGAGCACGGCACUGUUCUC   328 Target Full Sequence	2.5	Zea mays clone EL01N0521D08.c mRNA sequence	NA	coding protein	psRNATarget
EU944144.1	ncRNA:23   UCGGGUUCGUGCCGUGCCAAGAG   1   *|=||=||||||||||*|||||| targets:8   UGUCCGAGCACGGCACUGUUCUC   30 Target Full Sequence	2.5	Zea mays clone 1709701 mRNA sequence	NA	coding protein	psRNATarget
BT018463.1	ncRNA:23   UCGGGUUCGUGCCGUGCCAAGAG   1   *|=||=||||||||||*|||||| targets:1052   UGUCCGAGCACGGCACUGUUCUC   1074 Target Full Sequence	2.5	Zea mays clone EL01N0417C03.d mRNA sequence	NA	coding protein	psRNATarget
NM_001157682.2	ncRNA:23   UCGGGUUCGUGCCGUGCCAAGAG   1   |||=||||*|||||||||||*|| targets:184   AGCUCAAGAACGGCACGGUUGUC   206 Target Full Sequence	2.5	Zea mays uncharacterized LOC100284787 (pco096791), mRNA	NA	coding protein	psRNATarget
EU969687.1	ncRNA:23   UCGGGUUCGUGCCGUGCCAAGAG   1   |||=||||*|||||||||||*|| targets:184   AGCUCAAGAACGGCACGGUUGUC   206 Target Full Sequence	2.5	Zea mays clone 334021 small nuclear ribonucleoprotein Sm D1 mRNA, complete cds	NA	coding protein	psRNATarget
BT035041.1	ncRNA:23   UCGGGUUCGUGCCGUGCCAAGAG   1   |||=||||*|||||||||||*|| targets:982   AGCUCAAGAACGGCACGGUUGUC   1004 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0034E22 mRNA, complete cds	NA	coding protein	psRNATarget