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BaseInfo

ncRNA ID novel_zma_miR12028
Species Zea mays
Class miRNA
Genome position Chr9:4687811-4687875 [+]
Reference genome RefGen_v4
Source SRR5100255
Length 24
Mature sequence(if miRNA) 1 - ACCGAGAGUAGGAUUUUGCCGAGU - 24
Stem-loop(if miRNA) --    A    -A  -A             CCGA
  ACCG GAGU  GG  UUUUGCCGAGUGC    C
  |||| ||||  ||  |||||||||||||
  UGGC CUUA  CC  GAAACGGCUCACG    A
GA    -    GG  GA             AAAG
Stem-loop sequence ACCGAGAGUAGGAUUUUGCCGAGUGCCCGACAGAAAGCACUCGGCAAAGAGCCGGAUUCCGGUAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
LQ241867.1
ncRNA:24   UGAGCCGUUUUAGGAUGAGAGCCA   1
  ||||||||*|=|||||||||||||
targets:1   ACUCGGCAUAGUCCUACUCUCGGU   24

2.0 Sequence 7862 from Patent EP2985353 NA coding protein psRNATarget
HI409737.1
ncRNA:24   UGAGCCGUUUUAGGAUGAGAGCCA   1
  ||||||||*|=|||||||||||||
targets:1   ACUCGGCAUAGUCCUACUCUCGGU   24

2.0 Sequence 7862 from Patent EP2074227 NA coding protein psRNATarget
JB170198.1
ncRNA:24   UGAGCCGUUUUAGGAUGAGAGCCA   1
  ||||||||*|=|||||||||||||
targets:1   ACUCGGCAUAGUCCUACUCUCGGU   24

2.0 Sequence 7862 from Patent EP2559767 NA coding protein psRNATarget