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BaseInfo

ncRNA ID novel_zma_miR12023
Species Zea mays
Class miRNA
Genome position Chr9:5536160-5536249 [-]
Reference genome RefGen_v4
Source SRR5100255
Length 24
Mature sequence(if miRNA) 1 - AACACAACCGCCGGUGGAAACAUC - 24
Stem-loop(if miRNA) --                     AACACC           A   U
  UGUUUCCACUGGCGGUUGUGU      AACCGCCAGUG AAA U
  |||||||||||||||||||||      ||||||||||| |||
  ACAAAGGUGGCCGCCAACACA      UUGGCGGUCAC UUU G
CU                     AUUCUA           C   A
Stem-loop sequence UGUUUCCACUGGCGGUUGUGUAACACCAACCGCCAGUGAAAAUUGAUUUCCACUGGCGGUUAUCUUAACACAACCGCCGGUGGAAACAUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ103365.1
ncRNA:24   CUACAAAGGUGGCCGCCAACACAA   1
  |**|*|*||=|||||||||||||*
targets:38   GCCGCUGCCGCCGGCGGUUGUGUC   61

3.0 TSA: Zea mays contig39022, mRNA sequence NA coding protein psRNATarget