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BaseInfo

ncRNA ID	osa-miRf10799-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	21
Mature sequence(if miRNA)	NA - GGUUGGUAACACCAACCGAGA - NA
Stem-loop(if miRNA)	C        AAC                   -AUC GG    CUGACAAGGCCUGA GAUCUUUAGUC CGGUUGGU   ACCAACCGGGACUAAAGAU    G  GGGC              C ||||||||||| ||||||||   |||||||||||||||||||    |  ||||              A CUAGAAAUCAG GCCAACCA   UGGUUGGCCCUGAUUUUUA    A  AAUC              G            A        CAA                   CUAG --    AGGGCCAAGAUUUA
Stem-loop sequence	GAUCUUUAGUCCCGGUUGGUAACACCAACCGGGACUAAAGAUAUCGGGGGGCCUGACAAGGCCUGACAGAUUUAGAACCGGGACUAAAGAUCAUUUUUAGUCCCGGUUGGUAACACCAACCGAGACUAAAGAUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK099726.1	ncRNA:21   AGAGCCAACCACAAUGGUUGG   1   |||||||||||||||=||||| targets:1060   UCUCGGUUGGUGUUAUCAACC   1080 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J013089E05, full insert sequence	NA	coding protein	psRNATarget
AK061057.1	ncRNA:21   AGAGCCAACCACAAUGGUUGG   1   |||||||||||*||||||||| targets:404   UCUCGGUUGGUAUUACCAACC   424 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:006-205-H07, full insert sequence	NA	coding protein	psRNATarget
AK288377.1	ncRNA:21   AGAGCCAACCACAAUGGUUGG   1   ||*|||||||||||||||||| targets:1385   UCCCGGUUGGUGUUACCAACC   1405 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA, clone: J090026K06, full insert sequence	NA	coding protein	psRNATarget
AK289098.1	ncRNA:21   AGAGCCAACCACAAUGGUUGG   1   ||*|||||||||||||||||| targets:156   UCCCGGUUGGUGUUACCAACC   176 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA, clone: J090096E23, full insert sequence	NA	coding protein	psRNATarget
AK289098.1	ncRNA:21   AGAGCCAACCACAAUGGUUGG   1   ||*||||||||*||||||||| targets:113   UCCCGGUUGGUUUUACCAACC   133 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090096E23, full insert sequence	NA	coding protein	psRNATarget
AK288796.1	ncRNA:21   AGAGCCAACCACAAUGGUUGG   1   ||*|||||||||||||||||| targets:1839   UCCCGGUUGGUGUUACCAACC   1859 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA, clone: J090070F05, full insert sequence	NA	coding protein	psRNATarget
HI404286.1	ncRNA:21   AGAGCCAACCACAAUGGUUGG   1   |||||*||||||||||||||= targets:3   UCUCGAUUGGUGUUACCAACU   23 Target Full Sequence	2.0	Sequence 2411 from Patent EP2074227	NA	coding protein	psRNATarget
LQ236416.1	ncRNA:21   AGAGCCAACCACAAUGGUUGG   1   |||||*||||||||||||||= targets:3   UCUCGAUUGGUGUUACCAACU   23 Target Full Sequence	2.0	Sequence 2411 from Patent EP2985353	NA	coding protein	psRNATarget
JB164747.1	ncRNA:21   AGAGCCAACCACAAUGGUUGG   1   |||||*||||||||||||||= targets:3   UCUCGAUUGGUGUUACCAACU   23 Target Full Sequence	2.0	Sequence 2411 from Patent EP2559767	NA	coding protein	psRNATarget
XM_015758314.1	ncRNA:21   AGAGCCAACCACAAUGGUUGG   1   ||*|||||*|||||||||||| targets:915   UCCCGGUUUGUGUUACCAACC   935 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107278346 (LOC107278346), transcript variant X1, mRNA	uncharacterized LOC107278346(LOC107278346)	coding protein	psRNATarget
XM_015755226.1	ncRNA:21   AGAGCCAACCACAAUGGUUGG   1   ||*||||||*||||||||||| targets:79   UCCCGGUUGAUGUUACCAACC   99 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107278786 (LOC107278786), mRNA	uncharacterized LOC107278786(LOC107278786)	coding protein	psRNATarget
AK288424.1	ncRNA:21   AGAGCCAACCACAAUGGUUGG   1   ||*|||||*|||||||||||| targets:2390   UCCCGGUUAGUGUUACCAACC   2410 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090032J12, full insert sequence	NA	coding protein	psRNATarget
AK288463.1	ncRNA:21   AGAGCCAACCACAAUGGUUGG   1   ||*||||||||||*||||||| targets:564   UCCCGGUUGGUGUCACCAACC   584 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090036E20, full insert sequence	NA	coding protein	psRNATarget
AK121178.1	ncRNA:21   AGAGCCAACCACAAUGGUUGG   1   ||*||||||||*||||||||| targets:1917   UCCCGGUUGGUAUUACCAACC   1937 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J023083G22, full insert sequence	NA	coding protein	psRNATarget
AK288405.1	ncRNA:21   AGAGCCAACCACAAUGGUUGG   1   ||*|*|||||||||||||||| targets:2397   UCCCCGUUGGUGUUACCAACC   2417 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA, clone: J090030E11, full insert sequence	NA	coding protein	psRNATarget