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BaseInfo

ncRNA ID novel_zma_miR12013
Species Zea mays
Class miRNA
Genome position Chr9:40586211-40586267 [-]
Reference genome RefGen_v4
Source SRR5100255
Length 24
Mature sequence(if miRNA) 34 - AGGUAACUGAGGGUCUAAUUGUCU - 57
Stem-loop(if miRNA) --                -AA       U
  AGGUAACUGAGGGUCU   UUGUCUU A
  ||||||||||||||||   |||||||
  UCCAUUGGCUCCCAGA   GACGGAA G
UA                CGG       C
Stem-loop sequence AGGUAACUGAGGGUCUAAUUGUCUUUAGCAAGGCAGGGCAGACCCUCGGUUACCUAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020546301.1
ncRNA:24   UCUGUUAAUCUGGGAGUCAAUGGA   1
  ||||=|||=*=|||||||||||||
targets:1594   AGACGAUUGUGCCCUCAGUUACCU   1617

3.0 PREDICTED: Zea mays uncharacterized LOC109943356 (LOC109943356), mRNA NA coding protein psRNATarget