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BaseInfo

ncRNA ID	novel_zma_miR12007
Species	Zea mays
Class	miRNA
Genome position	Chr9:111252229-111252298 [-]
Reference genome	RefGen_v4
Source	SRR5100255
Length	22
Mature sequence(if miRNA)	1 - CUACUGUAGAGAACUUGGACCC - 22
Stem-loop(if miRNA)	--    U   - -      A   ---AG      GCC   GUCC GGU C CUAUGG AGU     CUGAGG   C   |||| ||| | |||||| |||     ||||||   G   CAGG UCA G GAUGUC UCG     GAUUCC   U CC    U   A A      A   GUGGA      AGC
Stem-loop sequence	GUCCUGGUCCUAUGGAAGUAGCUGAGGGCCCGUCGACCUUAGAGGUGGCUACUGUAGAGAACUUGGACCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT062701.1	ncRNA:22   CCCAGGUUCAAGAGAUGUCAUC   1   *||||||*|||||||||*|||| targets:711   AGGUCCAUGUUCUCUACUGUAG   732 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0334P04 mRNA, complete cds	NA	coding protein	psRNATarget
BT034065.1	ncRNA:22   CCCAGGUUCAAGAGAUGUCAUC   1   *||||||*|||||||||*|||| targets:559   AGGUCCAUGUUCUCUACUGUAG   580 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0033H19 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001137259.1	ncRNA:22   CCCAGGUUCAAGAGAUGUCAUC   1   *||||||*|||||||||*|||| targets:559   AGGUCCAUGUUCUCUACUGUAG   580 Target Full Sequence	2.5	Zea mays AFG1-like ATPase family protein (pco139673a), mRNA	NA	coding protein	psRNATarget
XM_008668847.2	ncRNA:22   CCCAGGUUCAAGAGAUGUCAUC   1   *||||||*|||||||||*|||| targets:525   AGGUCCAUGUUCUCUACUGUAG   546 Target Full Sequence	2.5	PREDICTED: Zea mays AFG1-like ATPase family protein (pco139673a), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_008668846.2	ncRNA:22   CCCAGGUUCAAGAGAUGUCAUC   1   *||||||*|||||||||*|||| targets:560   AGGUCCAUGUUCUCUACUGUAG   581 Target Full Sequence	2.5	PREDICTED: Zea mays AFG1-like ATPase family protein (pco139673a), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_020547358.1	ncRNA:22   CCCAGGUUCAAGAGAUGUCAUC   1   *||||||*|||||||||*|||| targets:634   AGGUCCAUGUUCUCUACUGUAG   655 Target Full Sequence	2.5	PREDICTED: Zea mays AFG1-like ATPase family protein (pco139673a), transcript variant X5, mRNA	NA	coding protein	psRNATarget
XM_020547359.1	ncRNA:22   CCCAGGUUCAAGAGAUGUCAUC   1   *||||||*|||||||||*|||| targets:835   AGGUCCAUGUUCUCUACUGUAG   856 Target Full Sequence	2.5	PREDICTED: Zea mays AFG1-like ATPase family protein (pco139673a), transcript variant X6, mRNA	NA	coding protein	psRNATarget
XM_008668845.2	ncRNA:22   CCCAGGUUCAAGAGAUGUCAUC   1   *||||||*|||||||||*|||| targets:788   AGGUCCAUGUUCUCUACUGUAG   809 Target Full Sequence	2.5	PREDICTED: Zea mays AFG1-like ATPase family protein (pco139673a), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008668844.2	ncRNA:22   CCCAGGUUCAAGAGAUGUCAUC   1   *||||||*|||||||||*|||| targets:835   AGGUCCAUGUUCUCUACUGUAG   856 Target Full Sequence	2.5	PREDICTED: Zea mays AFG1-like ATPase family protein (pco139673a), transcript variant X1, mRNA	NA	coding protein	psRNATarget