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BaseInfo

ncRNA ID	novel_zma_miR11997
Species	Zea mays
Class	miRNA
Genome position	Chr9:13543374-13543415 [+]
Reference genome	RefGen_v4
Source	SRR5100255
Length	21
Mature sequence(if miRNA)	1 - CGAACACUACGUCGUGCGCCG - 21
Stem-loop(if miRNA)	--C      UA   C          GAACAC  CGU GUGCGCC    ||||||  ||| ||||||G    CUUGUG  GCA CACGCGU GUU      UC   -
Stem-loop sequence	CGAACACUACGUCGUGCGCCGUGCGCACACGCUGUGUUCUUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JB169456.1	ncRNA:21   GCCGCGUGCUGCAUCACAAGC   1   =|||||=|||||||||||||| targets:28   UGGCGCGCGACGUAGUGUUCG   48 Target Full Sequence	1.0	Sequence 7120 from Patent EP2559767	NA	coding protein	psRNATarget
HI408995.1	ncRNA:21   GCCGCGUGCUGCAUCACAAGC   1   =|||||=|||||||||||||| targets:28   UGGCGCGCGACGUAGUGUUCG   48 Target Full Sequence	1.0	Sequence 7120 from Patent EP2074227	NA	coding protein	psRNATarget
LQ241125.1	ncRNA:21   GCCGCGUGCUGCAUCACAAGC   1   =|||||=|||||||||||||| targets:28   UGGCGCGCGACGUAGUGUUCG   48 Target Full Sequence	1.0	Sequence 7120 from Patent EP2985353	NA	coding protein	psRNATarget
XM_020538918.1	ncRNA:21   GCCGCGUGCUGCAUCACAAGC   1   ||||||=||||||||||||=| targets:1797   CGGCGCGCGACGUAGUGUUUG   1817 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100280126 (LOC100280126), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008667228.2	ncRNA:21   GCCGCGUGCUGCAUCACAAGC   1   |||*|||||||||=||||||| targets:395   CGGAGCACGACGUGGUGUUCG   415 Target Full Sequence	2.5	PREDICTED: Zea mays isoflavone 2'-hydroxylase (LOC103644036), mRNA	NA	coding protein	psRNATarget