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BaseInfo

ncRNA ID novel_zma_miR11996
Species Zea mays
Class miRNA
Genome position Chr9:152308595-152308656 [+]
Reference genome RefGen_v4
Source SRR5100255
Length 24
Mature sequence(if miRNA) 39 - ACGGUCUGCGACCUGGCGCGAGGC - 62
Stem-loop(if miRNA) --   UG      -       G     CU   
  CUC  GUUAGG CGCGGAC GUCCG  GCCU
  |||  |||||| ||||||| |||||  |||A
  GAG  CGGUCC GCGUCUG CAGGC  CGGA
CG   CG      A       G     --   
Stem-loop sequence CUCUGGUUAGGCGCGGACGGUCCGCUGCCUAAGGCCGGACGGUCUGCGACCUGGCGCGAGGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ096610.1
ncRNA:24   CGG---AGCGCGGUCCAGCGUCUGGCA   1
  |||---|||||=||||||||=||||||
targets:53   GCCACGUCGCGUCAGGUCGCGGACCGU   79

2.5 TSA: Zea mays contig32265, mRNA sequence NA coding protein psRNATarget