Search result

BaseInfo

ncRNA ID novel_zma_miR11995
Species Zea mays
Class miRNA
Genome position Chr9:149723191-149723237 [+]
Reference genome RefGen_v4
Source SRR5100255
Length 24
Mature sequence(if miRNA) 24 - AGGACACUCGGCAAAGACACUGUU - 47
Stem-loop(if miRNA) ---UA  -               A
     UG CUUUGCCGAGUGUCU C
     || ||||||||||||||| A
     AC GAAACGGCUCACAGG U
UUGUC  A               A
Stem-loop sequence UAUGCUUUGCCGAGUGUCUACAUAGGACACUCGGCAAAGACACUGUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU971646.1
ncRNA:24   UUGUCACAGAAACGGCUCACAGGA   1
  ||=*||||||||||||||||||=*
targets:823   AAUCGUGUCUUUGCCGAGUGUCUA   846

2.5 Zea mays clone 368614 hypothetical protein mRNA, complete cds NA coding protein psRNATarget
JB167100.1
ncRNA:24   UUGUCACAGAAACGGCUCACAGGA   1
  =|==|*|||||||||||||||||*
targets:14   GAUGGAGUCUUUGCCGAGUGUCCC   37

2.0 Sequence 4764 from Patent EP2559767 NA coding protein psRNATarget
LQ238769.1
ncRNA:24   UUGUCACAGAAACGGCUCACAGGA   1
  =|==|*|||||||||||||||||*
targets:14   GAUGGAGUCUUUGCCGAGUGUCCC   37

2.0 Sequence 4764 from Patent EP2985353 NA coding protein psRNATarget
HI406639.1
ncRNA:24   UUGUCACAGAAACGGCUCACAGGA   1
  =|==|*|||||||||||||||||*
targets:14   GAUGGAGUCUUUGCCGAGUGUCCC   37

2.0 Sequence 4764 from Patent EP2074227 NA coding protein psRNATarget