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BaseInfo

ncRNA ID novel_zma_miR11981
Species Zea mays
Class miRNA
Genome position Chr8:99833170-99833258 [+]
Reference genome RefGen_v4
Source SRR5100255
Length 24
Mature sequence(if miRNA) 66 - GAGCUUGAAUGAACUUGUGAGCCU - 89
Stem-loop(if miRNA) --     -    -G        CG  G A  G      CC   UCC
  GUUUA GAGU  GUUCGGGC  CU G GC UAAUAC  UAC   A
  ||||| ||||  ||||||||  || | || ||||||  |||
  CGAGU UUCA  UAAGUUCG  GA U CG GUUAUG  GUG   C
UC     G    AG        -A  G A  A      UA   UAU
Stem-loop sequence GUUUAGAGUGGUUCGGGCCGCUGGAGCGUAAUACCCUACUCCACUAUGUGAUGUAUUGAGCAUGAGAGCUUGAAUGAACUUGUGAGCCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU961461.1
ncRNA:24   UCCGAGUGUUCAAGUAAGUUCGAG   1
  |**|||||||||||||*|||||||
targets:121   AAACUCACAAGUUCAUACAAGCUC   144

1.5 Zea mays clone 235705 hypothetical protein mRNA, complete cds NA coding protein psRNATarget