ncRNA ID | novel_zma_miR11981 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr8:99833170-99833258 [+] |
Reference genome | RefGen_v4 |
Source | SRR5100255 |
Length | 24 |
Mature sequence(if miRNA) | 66 - GAGCUUGAAUGAACUUGUGAGCCU - 89 |
Stem-loop(if miRNA) |
--     -    -G        CG  G A  G      CC   UCC   GUUUA GAGU  GUUCGGGC  CU G GC UAAUAC  UAC   A   ||||| ||||  ||||||||  || | || ||||||  |||   CGAGU UUCA  UAAGUUCG  GA U CG GUUAUG  GUG   C UC     G    AG        -A  G A  A      UA   UAU |
Stem-loop sequence | GUUUAGAGUGGUUCGGGCCGCUGGAGCGUAAUACCCUACUCCACUAUGUGAUGUAUUGAGCAUGAGAGCUUGAAUGAACUUGUGAGCCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EU961461.1 |
|
1.5 | Zea mays clone 235705 hypothetical protein mRNA, complete cds | NA | coding protein | psRNATarget |