Search result

BaseInfo

ncRNA ID	osa-miRf10795-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	24
Mature sequence(if miRNA)	NA - GGUUUCGCGGGUUAGCCACUUACA - NA
Stem-loop(if miRNA)	A           G C G       -             C         G G UAG GGUGUAAGUGG U A CCGCGAA CCUAUUUAUAGAU AAAAUAAGC G C ||| ||||||||||| | | ||||||| ||||||||||||| ||||||||| | U AUC CCACAUUCACC A U GGCGCUU GGAUAAAUAUCUG UUUUAUUCG C C    C           G U G       U             A         G G
Stem-loop sequence	UAGAGGUGUAAGUGGGUCAGCCGCGAACCUAUUUAUAGAUCAAAAUAAGCGGGCUCGCGGCUUAUUUUAGUCUAUAAAUAGGUUUCGCGGGUUAGCCACUUACACCCCUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK106953.1	ncRNA:24   ACAUUCACCGAUUGGGCGCUUUGG   1   |||||||||=|||||||||||||| targets:320   UGUAAGUGGUUAACCCGCGAAACC   343 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA clone:002-119-E06, full insert sequence	NA	coding protein	psRNATarget
XM_015785563.1	ncRNA:24   ACAUUCACCGAUUGGGCGCUUUGG   1   ||||||*||||||||||||||||| targets:1817   UGUAAGCGGCUAACCCGCGAAACC   1840 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group lysosomal Pro-X carboxypeptidase (LOC4341667), transcript variant X1, mRNA	lysosomal Pro-X carboxypeptidase(LOC4341667)	coding protein	psRNATarget
AK068457.1	ncRNA:24   ACAUUCACCGAUUGGGCGCUUUGG   1   ||||||*||||||||||||||||| targets:1814   UGUAAGCGGCUAACCCGCGAAACC   1837 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA clone:J013151A14, full insert sequence	NA	coding protein	psRNATarget
AK107859.1	ncRNA:24   ACAUUCACCGAUUGGGCGCUUUGG   1   ||||=||||||||||||||||*|| targets:827   UGUAGGUGGCUAACCCGCGAAUCC   850 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:002-134-B05, full insert sequence	NA	coding protein	psRNATarget
XM_015769486.1	ncRNA:24   ACAUUCACCGAUUGGGCGCUUUGG   1   ||||=||||||||||||||||*|| targets:833   UGUAGGUGGCUAACCCGCGAAUCC   856 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4329481 (LOC4329481), mRNA	uncharacterized LOC4329481(LOC4329481)	coding protein	psRNATarget
AK102148.1	ncRNA:24   ACAUUCACCGAUUGGGCGCUUUGG   1   ||||=||||||||||||||||*|| targets:840   UGUAGGUGGCUAACCCGCGAAUCC   863 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J033086C12, full insert sequence	NA	coding protein	psRNATarget