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BaseInfo

ncRNA ID osa-miRf10793-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 21
Mature sequence(if miRNA) NA - CUAUCUGAUCAAUCUCUGCCA - NA
Stem-loop(if miRNA)                  -              A  - UG UUG
UCAUGCUAUCUGAUCAA UCUCUGCCAAAUAG UG U  G   G
||||||||||||||||| |||||||||||||| || |  |
AGUACGAUAGACUAGUU AGAGACGGUUUAUC AC G  U   A
                 U              -  U GU UUG
Stem-loop sequence UCAUGCUAUCUGAUCAAUCUCUGCCAAAUAGAUGUUGGUUGGAGUUUUGGUCACUAUUUGGCAGAGAUUUGAUCAGAUAGCAUGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AY785765.1
ncRNA:21   ACCGUCUCUAACUAGUCUAUC   1
  |***=||||||||||||||||
targets:181   UUCGGGAGAUUGAUCAGAUAG   201

3.0 Oryza sativa (indica cultivar-group) clone OS374212643 putative polynucleotide adenylyltransferase mRNA, complete cds NA coding protein psRNATarget
XM_015770828.1
ncRNA:21   ACCGUCUCUAACUAGUCUAUC   1
  |***=||||||||||||||||
targets:670   UUCGGGAGAUUGAUCAGAUAG   690

3.0 PREDICTED: Oryza sativa Japonica Group nuclear poly(A) polymerase 4 (LOC4328790), transcript variant X1, mRNA nuclear poly(A) polymerase 4(LOC4328790) coding protein psRNATarget
AK103143.1
ncRNA:21   ACCGUCUCUAACUAGUCUAUC   1
  |***=||||||||||||||||
targets:672   UUCGGGAGAUUGAUCAGAUAG   692

3.0 Oryza sativa Japonica Group cDNA clone:J033120H04, full insert sequence NA coding protein psRNATarget
XM_015770829.1
ncRNA:21   ACCGUCUCUAACUAGUCUAUC   1
  |***=||||||||||||||||
targets:664   UUCGGGAGAUUGAUCAGAUAG   684

3.0 PREDICTED: Oryza sativa Japonica Group nuclear poly(A) polymerase 4 (LOC4328790), transcript variant X2, mRNA nuclear poly(A) polymerase 4(LOC4328790) coding protein psRNATarget