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BaseInfo

ncRNA ID novel_zma_miR11958
Species Zea mays
Class miRNA
Genome position Chr8:56106794-56106942 [-]
Reference genome RefGen_v4
Source SRR5100255
Length 24
Mature sequence(if miRNA) 1 - GGAAGUUAAAAAACUGUAGGAAGU - 24
Stem-loop(if miRNA) --                      G             AAU  C         UAU  UU      --   A  UAC
  UUCCUACAGUUUUUUAACUUCC ACAGCUUUUAUAA   AC GUAGGAAGU   GU  AUUUCC  UAG GC   C
  |||||||||||||||||||||| |||||||||||||   || |||||||||   ||  ||||||  ||| ||
  AAGGAUGUCAAAAAAUUGAAGG UGUUGAAAAUAUU   UG CAUCCUUUA   UA  UGAAGG  AUC CG   A
UG                      A             GUU  A         -UU  -U      CU   -  UUG
Stem-loop sequence UUCCUACAGUUUUUUAACUUCCGACAGCUUUUAUAAAAUACCGUAGGAAGUUAUGUUUAUUUCCUAGAGCUACCAGUUGCCUAUCGGAAGUUAUUUAUUUCCUACAGUUUGUUAUAAAAGUUGUAGGAAGUUAAAAAACUGUAGGAAGU