Search result

BaseInfo

ncRNA ID	novel_zma_miR11948
Species	Zea mays
Class	miRNA
Genome position	Chr8:115724635-115724730 [-]
Reference genome	RefGen_v4
Source	SRR5100255
Length	23
Mature sequence(if miRNA)	1 - CCUUAUAAACCAUGCUAUCACAU - 23
Stem-loop(if miRNA)	--                                           A C   GUGAUAGCAUGGUUUAUAAGGUUGAGGGUGCAACCCCCUAAUA G U   ||||||||||||||||||||||||||||||||||||||||||| |   CACUAUCGUACCAAAUAUUCCAACUCCCACGUUGGGGGAUUAU C A UA                                           C G
Stem-loop sequence	GUGAUAGCAUGGUUUAUAAGGUUGAGGGUGCAACCCCCUAAUAAGCUAGCCUAUUAGGGGGUUGCACCCUCAACCUUAUAAACCAUGCUAUCACAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008664926.2	ncRNA:23   UACACUAUCGUACCAAAUAUUCC   1   =||||=||||||||||||||||| targets:255   GUGUGGUAGCAUGGUUUAUAAGG   277 Target Full Sequence	1.0	PREDICTED: Zea mays cysteine-rich receptor-like protein kinase 6 (LOC103641588), mRNA	NA	coding protein	psRNATarget
XM_008664926.2	ncRNA:23   UACACUAUCGUACCAAAUAUUCC   1   =||||=||||||||||||||||| targets:557   GUGUGGUAGCAUGGUUUAUAAGG   579 Target Full Sequence	1.0	PREDICTED: Zea mays cysteine-rich receptor-like protein kinase 6 (LOC103641588), mRNA	NA	coding protein	psRNATarget
EZ109122.1	ncRNA:23   UACACUAUCGUACCAAAUAUUCC   1   =|||||*|||||||||||||||| targets:144   GUGUGAAAGCAUGGUUUAUAAGG   166 Target Full Sequence	1.0	TSA: Zea mays contig44781, mRNA sequence	NA	coding protein	psRNATarget