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BaseInfo

ncRNA ID novel_zma_miR11943
Species Zea mays
Class miRNA
Genome position Chr8:147424356-147424407 [-]
Reference genome RefGen_v4
Source SRR5100255
Length 24
Mature sequence(if miRNA) 29 - AUUAAAUGGGUCGUGCCUUGGGCC - 52
Stem-loop(if miRNA) --A              C  --    C
   UUAAAUGGGUCGUG CU  UGGG C
   |||||||||||||| ||  ||||
   GGUUUACCCAGCAC GA  GCUC G
ACC              A  UC    G
Stem-loop sequence AUUAAAUGGGUCGUGCCUUGGGCCGGCUCGCUAGACACGACCCAUUUGGCCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU951651.1
ncRNA:24   CCGGGUUCCGUGCUGGGUAAAUUA   1
  *|||=|||*||||=||||||||||
targets:177   AGCCUAAGACACGGCCCAUUUAAU   200

2.5 Zea mays clone 987855 mRNA sequence NA coding protein psRNATarget