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BaseInfo

ncRNA ID novel_zma_miR11932
Species Zea mays
Class miRNA
Genome position Chr8:178291010-178291102 [+]
Reference genome RefGen_v4
Source SRR5100255
Length 25
Mature sequence(if miRNA) 1 - CUCAACUUUUGCAAAAUUAGAUAGC - 25
Stem-loop(if miRNA) --              A     A   CAA        U        
  CUCAACUUUUGCAA AUUAG UAG   GUUCAUUU GAUGUCAUU
  |||||||||||||| ||||| |||   |||||||| ||||||||G
  GAGUUGAAAACGUU UAAUC AUC   CAAGUAAA CUACGGUGA
GU              A     C   AAC        C        
Stem-loop sequence CUCAACUUUUGCAAAAUUAGAUAGCAAGUUCAUUUUGAUGUCAUUGAGUGGCAUCCAAAUGAACCAACUACCUAAUAUUGCAAAAGUUGAGUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ100563.1
ncRNA:25   CGAUAGAUUAAAACGUUUUCAACUC   1
  *=|||-||||||||||||=|||||*
targets:59   UUUAU-UAAUUUUGCAAAGGUUGAA   82

2.5 TSA: Zea mays contig36219, mRNA sequence NA coding protein psRNATarget