ncRNA ID | novel_zma_miR11909 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr7:84109518-84109593 [+] |
Reference genome | RefGen_v4 |
Source | SRR5100255 |
Length | 23 |
Mature sequence(if miRNA) | 1 - AGAAUGUAACACCCUGAAUUUGG - 23 |
Stem-loop(if miRNA) |
--   AU        C         -   GAA     UU   AGA  GUAACACC UGAAUUUGG GGG   UAAAA  U   |||  |||||||| ||||||||| |||   |||||   UCU  CAUUGUGG ACUUAAACC CUU   AUUUU  A CU   CU        -         A   AUA     UU |
Stem-loop sequence | AGAAUGUAACACCCUGAAUUUGGGGGGAAUAAAAUUUAUUUUUUAAUAUUCACCAAAUUCAGGUGUUACUCUCUUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_008669578.2 |
|
2.5 | PREDICTED: Zea mays uncharacterized LOC100279556 (LOC100279556), transcript variant X1, mRNA | NA | coding protein | psRNATarget |