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BaseInfo

ncRNA ID	novel_zma_miR11903
Species	Zea mays
Class	miRNA
Genome position	Chr7:54802316-54802372 [+]
Reference genome	RefGen_v4
Source	SRR5100255
Length	24
Mature sequence(if miRNA)	34 - UUUUGUCGGGCACUCGGUAAAGAA - 57
Stem-loop(if miRNA)	--                   CUUU  C   CUUUGCCGAGUGCUUGACG    GC G   |||||||||||||||||||    || A   GAAAUGGCUCACGGGCUGU    CG G AA                   UUUU  U
Stem-loop sequence	CUUUGCCGAGUGCUUGACGCUUUGCCGAGUGCUUUUUGUCGGGCACUCGGUAAAGAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008654495.2	ncRNA:24   AAGAAAUGGCUCACGGGCUGUUUU   1   ||||||=||||||||||||||||| targets:16   UUCUUUGCCGAGUGCCCGACAAAA   39 Target Full Sequence	1.0	PREDICTED: Zea mays probable GMP synthase [glutamine-hydrolyzing] (LOC103632764), mRNA	NA	coding protein	psRNATarget
XM_020545810.1	ncRNA:24   AAGAAAUGGCUCACGGGCUGUUUU   1   ||=|||==|||||||||||||||| targets:330   UUUUUUGUCGAGUGCCCGACAAAA   353 Target Full Sequence	2.0	PREDICTED: Zea mays zinc finger BED domain-containing protein RICESLEEPER 2-like (LOC109943047), mRNA	NA	coding protein	psRNATarget
BT055423.1	ncRNA:24   AAGAAAUGGCUCACGGGCUGUUUU   1   ||||||=||||||||||||*|||| targets:145   UUCUUUGCCGAGUGCCCGAAAAAA   168 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0179M04 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001165647.1	ncRNA:24   AAGAAAUGGCUCACGGGCUGUUUU   1   ||||||=||||||||||||*|||| targets:145   UUCUUUGCCGAGUGCCCGAAAAAA   168 Target Full Sequence	2.5	Zea mays uncharacterized LOC100304195 (LOC100304195), mRNA	NA	coding protein	psRNATarget
NM_001152461.1	ncRNA:24   AAGAAAUGGCUCACGGGCUGUUUU   1   ||||||=||||||||||||*|||| targets:2164   UUCUUUGCCGAGUGCCCGAAAAAA   2187 Target Full Sequence	2.5	Zea mays uncharacterized LOC100279456 (IDP836), mRNA	NA	coding protein	psRNATarget
BT054268.1	ncRNA:24   AAGAAAUGGCUCACGGGCUGUUUU   1   ||||||=||||||||||||*|||| targets:2164   UUCUUUGCCGAGUGCCCGAAAAAA   2187 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0206G23 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008671736.2	ncRNA:24   AAGAAAUGGCUCACGGGCUGUUUU   1   **||||=||||||||||||||||| targets:253   GACUUUGCCGAGUGCCCGACAAAA   276 Target Full Sequence	1.0	PREDICTED: Zea mays probable serine/threonine-protein kinase PBL28 (LOC103647166), mRNA	NA	coding protein	psRNATarget
BT062464.1	ncRNA:24   AAGAAAUGGCUCACGGGCUGUUUU   1   *|*||||||*|||||=|||||||| targets:1412   AUAUUUACCAAGUGCUCGACAAAA   1435 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0301K12 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001174651.1	ncRNA:24   AAGAAAUGGCUCACGGGCUGUUUU   1   *|*||||||*|||||=|||||||| targets:1412   AUAUUUACCAAGUGCUCGACAAAA   1435 Target Full Sequence	2.5	Zea mays uncharacterized LOC100381865 (LOC100381865), mRNA	NA	coding protein	psRNATarget
EU942517.1	ncRNA:24   AAGAAAUGGCUCACGGGCUGUUUU   1   *|*||*|||||||||*|||||||| targets:343   GUGUUCACCGAGUGCGCGACAAAA   366 Target Full Sequence	2.5	Zea mays clone 1513314 mRNA sequence	NA	coding protein	psRNATarget
BT016243.1	ncRNA:24   AAGAAAUGGCUCACGGGCUGUUUU   1   *|*||*|||||||||*|||||||| targets:376   GUGUUCACCGAGUGCGCGACAAAA   399 Target Full Sequence	2.5	Zea mays clone Contig76 mRNA sequence	NA	coding protein	psRNATarget
EU953353.1	ncRNA:24   AAGAAAUGGCUCACGGGCUGUUUU   1   *|*||*|||*|||||||||||||| targets:636   GUGUUCACCAAGUGCCCGACAAAA   659 Target Full Sequence	2.0	Zea mays clone 1401789 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
NM_001149136.1	ncRNA:24   AAGAAAUGGCUCACGGGCUGUUUU   1   *|*||*|||*|||||||||||||| targets:636   GUGUUCACCAAGUGCCCGACAAAA   659 Target Full Sequence	2.0	Zea mays uncharacterized LOC100274876 (LOC100274876), mRNA	NA	coding protein	psRNATarget
EU945770.1	ncRNA:24   AAGAAAUGGCUCACGGGCUGUUUU   1   *|*||||||*|||||*|||||||| targets:1048   GUGUUUACCAAGUGCGCGACAAAA   1071 Target Full Sequence	2.5	Zea mays clone 285253 mRNA sequence	NA	coding protein	psRNATarget
XM_020541358.1	ncRNA:24   AAGAAAUGGCUCACGGGCUGUUUU   1   *|*||*|||||||||*|||||||| targets:404   GUGUUCACCGAGUGCGCGACAAAA   427 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103632743 (LOC103632743), mRNA	NA	coding protein	psRNATarget