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BaseInfo

ncRNA ID	novel_zma_miR11878
Species	Zea mays
Class	miRNA
Genome position	Chr7:146465874-146465938 [-]
Reference genome	RefGen_v4
Source	SRR5100255
Length	24
Mature sequence(if miRNA)	1 - UUCUGUAUUUGGUAAUUUAGGUAC - 24
Stem-loop(if miRNA)	--C                 GA   C          UCUAAAUUGCUAAAUAU  AAA UAAAAUA    |||||||||||||||||  ||| ||||||G    GGAUUUAAUGGUUUAUG  UUU AUUUUGA CAU                 UC   A
Stem-loop sequence	CUCUAAAUUGCUAAAUAUGAAAACUAAAAUAGAGUUUUAAUUUCUGUAUUUGGUAAUUUAGGUAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
LQ235523.1	ncRNA:24   CAUGGAUUUAAUGGUUUAUGUCUU   1   ||*||||||||||*|||||||||| targets:20   GUCCCUAAAUUACAAAAUACAGAA   43 Target Full Sequence	1.5	Sequence 1518 from Patent EP2985353	NA	coding protein	psRNATarget
JB163854.1	ncRNA:24   CAUGGAUUUAAUGGUUUAUGUCUU   1   ||*||||||||||*|||||||||| targets:20   GUCCCUAAAUUACAAAAUACAGAA   43 Target Full Sequence	1.5	Sequence 1518 from Patent EP2559767	NA	coding protein	psRNATarget
HI403393.1	ncRNA:24   CAUGGAUUUAAUGGUUUAUGUCUU   1   ||*||||||||||*|||||||||| targets:20   GUCCCUAAAUUACAAAAUACAGAA   43 Target Full Sequence	1.5	Sequence 1518 from Patent EP2074227	NA	coding protein	psRNATarget
BT083556.2	ncRNA:24   CAUG--GAUUUAAUGGUUUAUGUCUU   1   *|||--||=||||||||||||||||= targets:34   CUACAGCUGAAUUACCAAAUACAGAG   59 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0011L13 mRNA, complete cds	NA	coding protein	psRNATarget
EZ060524.1	ncRNA:24   CAUGGAUUUAAUGGUUUAUGUCUU   1   ||*||*|||||||||||||=|||| targets:96   GUUCCAAAAUUACCAAAUAUAGAA   119 Target Full Sequence	2.5	TSA: Zea mays contig61646, mRNA sequence	NA	coding protein	psRNATarget