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BaseInfo

ncRNA ID novel_zma_miR11855
Species Zea mays
Class miRNA
Genome position Chr7:119425078-119425165 [+]
Reference genome RefGen_v4
Source SRR5100255;SRR5105963
Length 21
Mature sequence(if miRNA) 68 - CUCUUCAAUACCCUCCGGUUU - 88
Stem-loop(if miRNA) --         G                   -    G       A
  ACCGGAGGG AUUGGAGGGGCUAAAAUCC UCUC UUAUUCA U
  ||||||||| ||||||||||||||||||| |||| |||||||
  UGGCCUCCC UAACUUCUCCGAUUUUAGG AGAG AAUAAGU U
UU         A                   G    -       U
Stem-loop sequence ACCGGAGGGGAUUGGAGGGGCUAAAAUCCUCUCGUUAUUCAAUUUUGAAUAAGAGAGGGAUUUUAGCCUCUUCAAUACCCUCCGGUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008664337.2
ncRNA:21   UUUGGCCUCCCAUAACUUCUC   1
  ==|==|*||||||||||||||
targets:2134   GGAUUGAAGGGUAUUGAAGAG   2154

3.0 PREDICTED: Zea mays ABC transporter F family member 1 (LOC103640881), mRNA NA coding protein psRNATarget