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BaseInfo

ncRNA ID novel_zma_miR11852
Species Zea mays
Class miRNA
Genome position Chr6:100718425-100718485 [+]
Reference genome RefGen_v4
Source SRR5100255
Length 24
Mature sequence(if miRNA) 38 - AAUGUUUCAAUGGACGAAGGUCGU - 61
Stem-loop(if miRNA) --   A       ---    UU      A  AU
  GAC UUCGUCU   GAAG  CAUUAU UC  U
  ||| |||||||   ||||  |||||| ||
  CUG AAGCAGG   CUUU  GUAAUA AG  G
UG   G       UAA    --      A  GG
Stem-loop sequence GACAUUCGUCUGAAGUUCAUUAUAUCAUUGGGGAAAUAAUGUUUCAAUGGACGAAGGUCGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008680517.2
ncRNA:24   UGCUGGAAGCAGGUAACUUUGUAA   1
  |*|*||||=||||||*||||||||
targets:8962   AAGUCCUUUGUCCAUCGAAACAUU   8985

2.5 PREDICTED: Zea mays pentatricopeptide repeat-containing protein At5g65560 (LOC103653689), mRNA NA coding protein psRNATarget