Search result

BaseInfo

ncRNA ID novel_zma_miR11842
Species Zea mays
Class miRNA
Genome position Chr6:66291582-66291638 [+]
Reference genome RefGen_v4
Source SRR5100255
Length 24
Mature sequence(if miRNA) 1 - AGGUAACUGAGGGUCUAAUUGUCU - 24
Stem-loop(if miRNA) --                -AA       U
  AGGUAACUGAGGGUCU   UUGUCUU A
  ||||||||||||||||   |||||||
  UCCAUUGGCUCCCGGA   GACGGAA U
UA                CGG       C
Stem-loop sequence AGGUAACUGAGGGUCUAAUUGUCUUUAUCAAGGCAGGGCAGGCCCUCGGUUACCUAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020546301.1
ncRNA:24   UCUGUUAAUCUGGGAGUCAAUGGA   1
  ||||=|||=*=|||||||||||||
targets:1594   AGACGAUUGUGCCCUCAGUUACCU   1617

3.0 PREDICTED: Zea mays uncharacterized LOC109943356 (LOC109943356), mRNA NA coding protein psRNATarget