Search result

BaseInfo

ncRNA ID	novel_zma_miR11834
Species	Zea mays
Class	miRNA
Genome position	Chr9:121908449-121908543 [-]
Reference genome	RefGen_v4
Source	SRR1997865
Length	22
Mature sequence(if miRNA)	1 - UCUAGAAAAGCUAAAACGACUU - 22
Stem-loop(if miRNA)	--          AUUU   C    A   UUUUACUACGUAUCUAGACAU   GUCGUUUUGG    UCU GAUA UAG                     G   ||||||||||    ||| |||| |||                     G   CAGCAAAAUC    AAA GAUC UAC                     C UU          --GA   -    -   GUCGAUACGUGGAUCUUUAUA
Stem-loop sequence	GUCGUUUUGGAUUUUCUCGAUAAUAGUUUUACUACGUAUCUAGACAUGGCAUAUUUCUAGGUGCAUAGCUGCAUCUAGAAAAGCUAAAACGACUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT035113.1	ncRNA:22   UUCAGCAAAAUCGAAAAGAUCU   1   |||*=||||||||||||||||| targets:592   AAGAUGUUUUAGCUUUUCUAGA   613 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0040E05 mRNA, complete cds	NA	coding protein	psRNATarget
XM_020546942.1	ncRNA:22   UUCAGCAAAAUCGAAAAGAUCU   1   ||||||||*||*|||||||||| targets:134   AAGUCGUUCUAACUUUUCUAGA   155 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC109943549 (LOC109943549), mRNA	NA	coding protein	psRNATarget
NM_001349964.1	ncRNA:22   UUCAGCAAAAUCGAAAAGAUCU   1   |||||*||||||||||||||*| targets:1279   AAGUCAUUUUAGCUUUUCUAAA   1300 Target Full Sequence	2.5	Zea mays uncharacterized LOC100278112 (IDP592), mRNA	NA	coding protein	psRNATarget