ncRNA ID | osa-miRf10780-npr |
Species | Oryza sativa |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 20 |
Mature sequence(if miRNA) | NA - AUGGUGUCCCAUCCCCAUCU - NA |
Stem-loop(if miRNA) |
               C       U     C    AACAACGA     C      A  C AAGCUAACUUAGAUG GGAUGGG CACCA CUAG        GACAA GAAUCU GA A ||||||||||||||| ||||||| ||||| ||||        ||||| |||||| || UUCGGUUGAAUCUAC CCUACCC GUGGU GAUC        CUGUU CUUAGA CU U                C       U     A    --------     A      C  G |
Stem-loop sequence | AAGCUAACUUAGAUGCGGAUGGGUCACCACCUAGAACAACGAGACAACGAAUCUAGACAUGUCCAGAUUCAUUGUCCUAGAUGGUGUCCCAUCCCCAUCUAAGUUGGCUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
FJ940198.1 |
|
2.5 | Oryza sativa Japonica Group clone KCS632G01 chaperonin mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
XM_015776545.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group chaperonin CPN60-1, mitochondrial (LOC4331590), mRNA | chaperonin CPN60-1, mitochondrial(LOC4331590) | coding protein | psRNATarget | |||||||||
AK073999.1 |
|
2.5 | Oryza sativa Japonica Group cDNA clone:J033073C08, full insert sequence | NA | coding protein | psRNATarget |