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BaseInfo

ncRNA ID osa-miRf10780-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - AUGGUGUCCCAUCCCCAUCU - NA
Stem-loop(if miRNA)                C       U     C    AACAACGA     C      A  C
AAGCUAACUUAGAUG GGAUGGG CACCA CUAG        GACAA GAAUCU GA A
||||||||||||||| ||||||| ||||| ||||        ||||| |||||| ||
UUCGGUUGAAUCUAC CCUACCC GUGGU GAUC        CUGUU CUUAGA CU U
               C       U     A    --------     A      C  G
Stem-loop sequence AAGCUAACUUAGAUGCGGAUGGGUCACCACCUAGAACAACGAGACAACGAAUCUAGACAUGUCCAGAUUCAUUGUCCUAGAUGGUGUCCCAUCCCCAUCUAAGUUGGCUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
FJ940198.1
ncRNA:20   UCUACCCCUACCCUGUGGUA   1
  *|*|||||||||||||*|||
targets:379   UGCUGGGGAUGGGACAACAU   398

2.5 Oryza sativa Japonica Group clone KCS632G01 chaperonin mRNA, complete cds NA coding protein psRNATarget
XM_015776545.1
ncRNA:20   UCUACCCCUACCCUGUGGUA   1
  *|*|||||||||||||*|||
targets:494   UGCUGGGGAUGGGACAACAU   513

2.5 PREDICTED: Oryza sativa Japonica Group chaperonin CPN60-1, mitochondrial (LOC4331590), mRNA chaperonin CPN60-1, mitochondrial(LOC4331590) coding protein psRNATarget
AK073999.1
ncRNA:20   UCUACCCCUACCCUGUGGUA   1
  *|*|||||||||||||*|||
targets:448   UGCUGGGGAUGGGACAACAU   467

2.5 Oryza sativa Japonica Group cDNA clone:J033073C08, full insert sequence NA coding protein psRNATarget