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BaseInfo

ncRNA ID	ath-miRf10126-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	23
Mature sequence(if miRNA)	NA - CUACUCGACCAGGGGGUCGAGUG - NA
Stem-loop(if miRNA)	-          G           -U  G  G A AGAC ACUCGACCUC UGGUCGAGUGG  GA GU A G |||| |||||||||| |||||||||||  || || | U UCUG UGAGCUGGGG ACCAGCUCAUC  CU UA U G     G          G           UC  G  G G
Stem-loop sequence	AGACACUCGACCUCGUGGUCGAGUGGUGAGGUGAAGUGGUGAUGUCCUCUACUCGACCAGGGGGUCGAGUGGUCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
DQ069808.1	ncRNA:23   GUGAGCUGGGGGACCAGCUCAUC   1   ||||||||||||||||||||||| targets:91   CACUCGACCCCCUGGUCGAGUAG   113 Target Full Sequence	0.0	Arabidopsis thaliana At2g10880 mRNA, partial sequence	NA	coding protein	psRNATarget
EF183192.1	ncRNA:23   GUGAGCUGGGGGACCAGCUCAUC   1   ||||||||||||||||||||||| targets:125   CACUCGACCCCCUGGUCGAGUAG   147 Target Full Sequence	0.0	Arabidopsis thaliana clone asmbl_2299 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183193.1	ncRNA:23   GUGAGCUGGGGGACCAGCUCAUC   1   ||||||||||||||||||||||| targets:500   CACUCGACCCCCUGGUCGAGUAG   522 Target Full Sequence	0.0	Arabidopsis thaliana clone asmbl_2300 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183191.1	ncRNA:23   GUGAGCUGGGGGACCAGCUCAUC   1   ||||||||||||||||||||||| targets:500   CACUCGACCCCCUGGUCGAGUAG   522 Target Full Sequence	0.0	Arabidopsis thaliana clone asmbl_2298 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183042.1	ncRNA:23   GUGAGCUGGGGGACCAGCUCAUC   1   ||||||||||||||||||||||| targets:1572   CACUCGACCCCCUGGUCGAGUAG   1594 Target Full Sequence	0.0	Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence	NA	coding protein	psRNATarget
BT015478.1	ncRNA:23   GUGAGCUGGGGGACCAGCUCAUC   1   ||||||||||||||||||||||* targets:231   CACUCGACCCCCUGGUCGAGUAU   253 Target Full Sequence	1.0	Arabidopsis thaliana At4g05636 mRNA sequence	NA	coding protein	psRNATarget
BT015478.1	ncRNA:23   GUGAGCUGGGGGACCAGCUCAUC   1   =|||||||||||||||||||||* targets:182   UACUCGACCCCCUGGUCGAGUAU   204 Target Full Sequence	1.0	Arabidopsis thaliana At4g05636 mRNA sequence	NA	coding protein	psRNATarget
BT014714.1	ncRNA:23   GUGAGCUGGGGGACCAGCUCAUC   1   ||||||||||||||||||||||* targets:231   CACUCGACCCCCUGGUCGAGUAU   253 Target Full Sequence	1.0	Arabidopsis thaliana At4g05636.1 mRNA sequence	NA	coding protein	psRNATarget
BT014714.1	ncRNA:23   GUGAGCUGGGGGACCAGCUCAUC   1   =|||||||||||||||||||||* targets:182   UACUCGACCCCCUGGUCGAGUAU   204 Target Full Sequence	1.0	Arabidopsis thaliana At4g05636.1 mRNA sequence	NA	coding protein	psRNATarget
BT025674.1	ncRNA:23   GUGAGCUGGGGGACCAGCUCAUC   1   =|||||||||||||||||||||* targets:309   UACUCGACCCCCUGGUCGAGUAU   331 Target Full Sequence	1.0	Arabidopsis thaliana	NA	coding protein	psRNATarget
AY231407.1	ncRNA:23   GUGAGCUGGGGGACCAGCUCAUC   1   =||*||||||||||||||||||* targets:584   UACYCGACCCCCUGGUCGAGUAU   606 Target Full Sequence	1.0	Arabidopsis thaliana hypothetical protein (At2g11090/F15K19.16) mRNA, complete cds	NA	coding protein	psRNATarget
AY231407.1	ncRNA:23   GUGAGCUGGGGGACCAGCUCAUC   1   |||||||||||*||||||||||| targets:490   CACUCGACCCCGUGGUCGAGUAG   512 Target Full Sequence	1.5	Arabidopsis thaliana hypothetical protein (At2g11090/F15K19.16) mRNA, complete cds	NA	coding protein	psRNATarget
NM_103391.1	ncRNA:23   GUGAGCUGGGGGACCAGCUCAUC   1   ||||||||||||*|||||||||| targets:1105   CACUCGACCCCCAGGUCGAGUAG   1127 Target Full Sequence	1.5	Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA	DNAse I-like superfamily protein(AT1G40390)	coding protein	psRNATarget
BT015478.1	ncRNA:23   GUGAGCUGGGGGACCAGCUCAUC   1   =||||*||||||||||||||||* targets:302   UACUCAACCCCCUGGUCGAGUAU   324 Target Full Sequence	2.0	Arabidopsis thaliana At4g05636 mRNA sequence	NA	coding protein	psRNATarget
BT014714.1	ncRNA:23   GUGAGCUGGGGGACCAGCUCAUC   1   =||||*||||||||||||||||* targets:302   UACUCAACCCCCUGGUCGAGUAU   324 Target Full Sequence	2.0	Arabidopsis thaliana At4g05636.1 mRNA sequence	NA	coding protein	psRNATarget
EF183192.1	ncRNA:23   GUGAGCUGGGGGACCAGCUCAUC   1   ||*||*|||||*||||||||||| targets:170   CAGUCAACCCCGUGGUCGAGUAG   192 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_2299 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183193.1	ncRNA:23   GUGAGCUGGGGGACCAGCUCAUC   1   ||*||*|||||*||||||||||| targets:545   CAGUCAACCCCGUGGUCGAGUAG   567 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_2300 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183191.1	ncRNA:23   GUGAGCUGGGGGACCAGCUCAUC   1   ||*||*|||||*||||||||||| targets:545   CAGUCAACCCCGUGGUCGAGUAG   567 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_2298 unknown mRNA sequence	NA	coding protein	psRNATarget
BT025674.1	ncRNA:23   GUGAGCUGGGGGACCAGCUCAUC   1   =|||||||||||*|||||||||* targets:188   UACUCGACCCCCAGGUCGAGUAA   210 Target Full Sequence	2.5	Arabidopsis thaliana	NA	coding protein	psRNATarget
AY231407.1	ncRNA:23   GUGAGCUGGGGGACCAGCUCAUC   1   |||||||||||*||||||||||* targets:536   CACUCGACCCCAUGGUCGAGUAC   558 Target Full Sequence	2.5	Arabidopsis thaliana hypothetical protein (At2g11090/F15K19.16) mRNA, complete cds	NA	coding protein	psRNATarget
EF183194.1	ncRNA:23   GUGAGCUGGGGGACCAGCUCAUC   1   |||||||||*||*|||||||||| targets:450   CACUCGACCACCAGGUCGAGUAG   472 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_2339 unknown mRNA sequence	NA	coding protein	psRNATarget