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BaseInfo

ncRNA ID novel_zma_miR11827
Species Zea mays
Class miRNA
Genome position Chr5:15331750-15331936 [-]
Reference genome RefGen_v4
Source SRR1583942
Length 22
Mature sequence(if miRNA) 166 - GUGUACUAUGUCCAGAUGUGUG - 187
Stem-loop(if miRNA) --       A     AG                  A          CA   G   G                   CUCUUAG  G  G       U
  GUGUACU UGUCC  AUGUGUGGUCACAAAAUU AAAGUCGCCC  GCU CAU UGUGUGCUUCUCUUCUCUU       GU GG UGCUAAG G
  ||||||| |||||  |||||||||||||||||| ||||||||||  ||| ||| |||||||||||||||||||       || || |||||||
  CACAUGA ACAGG  UACACACCAGUGUUUUAA UUUCAGCGGG  CGA GUA ACACGCGAAGAGAAGAGAA       CA CC AUGAUUC A
GC       G     CU                  A          AC   A   G                   -----UA  A  G       U
Stem-loop sequence GUGUACUAUGUCCAGAUGUGUGGUCACAAAAUUAAAAGUCGCCCCAGCUGCAUGUGUGUGCUUCUCUUCUCUUCUCUUAGGUGGGGUGCUAAGUGAUCUUAGUAGCCAACAUAAGAGAAGAGAAGCGCACAGAUGAAGCCAGGGCGACUUUAAAUUUUGUGACCACACAUUCGGACAGAGUACACCG