ncRNA ID | novel_zma_miR11827 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr5:15331750-15331936 [-] |
Reference genome | RefGen_v4 |
Source | SRR1583942 |
Length | 22 |
Mature sequence(if miRNA) | 166 - GUGUACUAUGUCCAGAUGUGUG - 187 |
Stem-loop(if miRNA) |
--       A     AG                  A          CA   G   G                   CUCUUAG  G  G       U   GUGUACU UGUCC  AUGUGUGGUCACAAAAUU AAAGUCGCCC  GCU CAU UGUGUGCUUCUCUUCUCUU       GU GG UGCUAAG G   ||||||| |||||  |||||||||||||||||| ||||||||||  ||| ||| |||||||||||||||||||       || || |||||||   CACAUGA ACAGG  UACACACCAGUGUUUUAA UUUCAGCGGG  CGA GUA ACACGCGAAGAGAAGAGAA       CA CC AUGAUUC A GC       G     CU                  A          AC   A   G                   -----UA  A  G       U |
Stem-loop sequence | GUGUACUAUGUCCAGAUGUGUGGUCACAAAAUUAAAAGUCGCCCCAGCUGCAUGUGUGUGCUUCUCUUCUCUUCUCUUAGGUGGGGUGCUAAGUGAUCUUAGUAGCCAACAUAAGAGAAGAGAAGCGCACAGAUGAAGCCAGGGCGACUUUAAAUUUUGUGACCACACAUUCGGACAGAGUACACCG |