ncRNA ID | novel_zma_miR11822 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:93530516-93530659 [+] |
Reference genome | RefGen_v4 |
Source | SRR5100255 |
Length | 24 |
Mature sequence(if miRNA) | 121 - AUUUCCACUGGCGGUUUUUAAAGC - 144 |
Stem-loop(if miRNA) |
--C      CA                                        UAAGA                U    UUAAAA  ACCGCCAGUGGAAAUAGGAUGUUUCCACUGGCGGUUGUGU     UAACCGCCAGUGGAAA C    ||||||  ||||||||||||||||||||||||||||||||||||||||     ||||||||||||||||    AAUUUU  UGGCGGUCACCUUUAUCCUACAAAGGUGACCGCCAACACA     GUUGGCGGUCACUUUU A CGA      --                                        UUGUG                A |
Stem-loop sequence | CUUAAAACAACCGCCAGUGGAAAUAGGAUGUUUCCACUGGCGGUUGUGUUAAGAUAACCGCCAGUGGAAAUCAAUUUUCACUGGCGGUUGGUGUUACACAACCGCCAGUGGAAACAUCCUAUUUCCACUGGCGGUUUUUAAAGC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT069194.2 |
|
2.0 | Zea mays full-length cDNA clone ZM_BFb0304H22 mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
NM_001176701.1 |
|
2.0 | Zea mays uncharacterized LOC100384113 (LOC100384113), mRNA | NA | coding protein | psRNATarget |