Search result

BaseInfo

ncRNA ID	novel_zma_miR11820
Species	Zea mays
Class	miRNA
Genome position	Chr6:97858683-97858769 [-]
Reference genome	RefGen_v4
Source	SRR5100255
Length	24
Mature sequence(if miRNA)	1 - ACAGAACACUCGGCAAAGAACCUG - 24
Stem-loop(if miRNA)	--                  A   C  U              AG   GGUUCUUUGCCGAGUGUU UGU GC GGCACUCGGCAAAG  G   |||||||||||||||||| ||| || ||||||||||||||  U   CCAAGAAACGGCUCACAA ACA CG CCGUGAGCCGUUUC  U GU                  G   -  -              GG
Stem-loop sequence	GGUUCUUUGCCGAGUGUUAUGUCGCUGGCACUCGGCAAAGAGGUUGGCUUUGCCGAGUGCCGCACAGAACACUCGGCAAAGAACCUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JB169026.1	ncRNA:24   GUCCAAGAAACGGCUCACAAGACA   1   =|||||||||||||||||||*||| targets:3   UAGGUUCUUUGCCGAGUGUUAUGU   26 Target Full Sequence	1.5	Sequence 6690 from Patent EP2559767	NA	coding protein	psRNATarget
LQ240695.1	ncRNA:24   GUCCAAGAAACGGCUCACAAGACA   1   =|||||||||||||||||||*||| targets:3   UAGGUUCUUUGCCGAGUGUUAUGU   26 Target Full Sequence	1.5	Sequence 6690 from Patent EP2985353	NA	coding protein	psRNATarget
HI408565.1	ncRNA:24   GUCCAAGAAACGGCUCACAAGACA   1   =|||||||||||||||||||*||| targets:3   UAGGUUCUUUGCCGAGUGUUAUGU   26 Target Full Sequence	1.5	Sequence 6690 from Patent EP2074227	NA	coding protein	psRNATarget