| ncRNA ID | novel_zma_miR11809 |
| Species | Zea mays |
| Class | miRNA |
| Genome position | Chr6:132448666-132448881 [-] |
| Reference genome | RefGen_v4 |
| Source | SRR5100255 |
| Length | 21 |
| Mature sequence(if miRNA) | 1 - ACCGGCUCACCAUCGUUUGGC - 21 |
| Stem-loop(if miRNA) |
-- A C G G G G G U CAGACGAUGGUGAGCCGGUGUACU UGUCCGGAUGUGUGGUCACAAAAUUUAAAG CGCCUCGGCU CAU UGUGUGCUUCUCUUCUCUUA GU GG UGCUAAG G |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| ||| |||||||||||||||||||| || || ||||||| GUUUGCUACCACUCGGCCACAUGA ACAGGCUUACACACCAGUGUUUUAAAUUUC GCGGGGCCGA GUA AUACGCGAAGAGAAGAGAAU CA CC AUGAUUC A CG G A A G A G G U |
| Stem-loop sequence | CAGACGAUGGUGAGCCGGUGUACUAUGUCCGGAUGUGUGGUCACAAAAUUUAAAGCCGCCUCGGCUGCAUGUGUGUGCUUCUCUUCUCUUAGGUGGGGUGCUAAGUGAUCUUAGUAGCCGACAUAAGAGAAGAGAAGCGCAUAGAUGAAGCCGGGGCGACUUUAAAUUUUGUGACCACACAUUCGGACAGAGUACACCGGCUCACCAUCGUUUGGC |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_020538582.1 |
|
1.0 | PREDICTED: Zea mays B3 domain-containing protein Os02g0598200 (LOC103628738), transcript variant X2, mRNA | NA | coding protein | psRNATarget | |||||||||
| XM_020538581.1 |
|
1.0 | PREDICTED: Zea mays B3 domain-containing protein Os02g0598200 (LOC103628738), transcript variant X1, mRNA | NA | coding protein | psRNATarget |