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BaseInfo

ncRNA ID novel_zma_miR11805
Species Zea mays
Class miRNA
Genome position Chr6:151816062-151816154 [-]
Reference genome RefGen_v4
Source SRR5100255
Length 24
Mature sequence(if miRNA) 1 - AAGGAACCGCCAGUAGAAUUACGA - 24
Stem-loop(if miRNA) --   U     G                         C  C     
  GUA UUCUA UGGCGGUUCCUUAAGAAAACCGCCA UA AAAUCA
  ||| ||||| ||||||||||||||||||||||||| || |||||U
  CAU AAGAU ACCGCCAAGGAAUUCUUUUGGCGGU AU UUUAGG
AG   U     G                         C  C     
Stem-loop sequence GUAUUUCUAGUGGCGGUUCCUUAAGAAAACCGCCACUACAAAUCAUGGAUUUCUACUGGCGGUUUUCUUAAGGAACCGCCAGUAGAAUUACGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
LQ235114.1
ncRNA:24   AGCAUUAAGAUGACCGCCAAGGAA   1
  ||*||*||||||*|||||||||||
targets:32   UCAUAUUUCUACAGGCGGUUCCUU   55

2.5 Sequence 1109 from Patent EP2985353 NA coding protein psRNATarget
JB163445.1
ncRNA:24   AGCAUUAAGAUGACCGCCAAGGAA   1
  ||*||*||||||*|||||||||||
targets:32   UCAUAUUUCUACAGGCGGUUCCUU   55

2.5 Sequence 1109 from Patent EP2559767 NA coding protein psRNATarget
HI402984.1
ncRNA:24   AGCAUUAAGAUGACCGCCAAGGAA   1
  ||*||*||||||*|||||||||||
targets:32   UCAUAUUUCUACAGGCGGUUCCUU   55

2.5 Sequence 1109 from Patent EP2074227 NA coding protein psRNATarget