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BaseInfo

ncRNA ID	novel_zma_miR11797
Species	Zea mays
Class	miRNA
Genome position	Chr6:169126525-169126573 [-]
Reference genome	RefGen_v4
Source	SRR5100255
Length	21
Mature sequence(if miRNA)	29 - ACUGUUCGGUGUGCCACUGGA - 49
Stem-loop(if miRNA)	--           -   C          ACUGUUCGGUG UGC ACUGGACA   ||||||||||| ||| |||||||G   UGACAAGCCAC ACG UGGCCUGU UG           C   -
Stem-loop sequence	ACUGUUCGGUGUGCCACUGGACAGUGUCCGGUGCACCACCGAACAGUGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EZ106959.1	ncRNA:21   AGGUCACCGUGUGGCUUGUCA   1   |||=|||||||||||=||||| targets:92   UCCGGUGGCACACCGGACAGU   112 Target Full Sequence	2.5	TSA: Zea mays contig42617, mRNA sequence	NA	coding protein	psRNATarget
BT083610.2	ncRNA:21   AGGUCACCGUGUGGCUUGUCA   1   |||=|||||||||||=||||| targets:795   UCCGGUGGCACACCGGACAGU   815 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0019A02 mRNA, complete cds	NA	coding protein	psRNATarget
HI409410.1	ncRNA:21   AGGUCACCGUGUGGCUUGUCA   1   ||||*||||||||||=||||| targets:8   UCCACUGGCACACCGGACAGU   28 Target Full Sequence	2.5	Sequence 7535 from Patent EP2074227	NA	coding protein	psRNATarget
LQ241540.1	ncRNA:21   AGGUCACCGUGUGGCUUGUCA   1   ||||*||||||||||=||||| targets:8   UCCACUGGCACACCGGACAGU   28 Target Full Sequence	2.5	Sequence 7535 from Patent EP2985353	NA	coding protein	psRNATarget
JB169871.1	ncRNA:21   AGGUCACCGUGUGGCUUGUCA   1   ||||*||||||||||=||||| targets:8   UCCACUGGCACACCGGACAGU   28 Target Full Sequence	2.5	Sequence 7535 from Patent EP2559767	NA	coding protein	psRNATarget
LQ242062.1	ncRNA:21   AGGUCACCGUGUGGCUUGUCA   1   *||*|||||||||||=||||| targets:7   GCCUGUGGCACACCGGACAGU   27 Target Full Sequence	2.5	Sequence 8057 from Patent EP2985353	NA	coding protein	psRNATarget
HI409932.1	ncRNA:21   AGGUCACCGUGUGGCUUGUCA   1   *||*|||||||||||=||||| targets:7   GCCUGUGGCACACCGGACAGU   27 Target Full Sequence	2.5	Sequence 8057 from Patent EP2074227	NA	coding protein	psRNATarget
JB170393.1	ncRNA:21   AGGUCACCGUGUGGCUUGUCA   1   *||*|||||||||||=||||| targets:7   GCCUGUGGCACACCGGACAGU   27 Target Full Sequence	2.5	Sequence 8057 from Patent EP2559767	NA	coding protein	psRNATarget
EU940845.1	ncRNA:21   AGGUCACCGUGUGGCUUGUCA   1   *||*|||||||||||=||||| targets:1377   GCCCGUGGCACACCGGACAGU   1397 Target Full Sequence	2.5	Zea mays clone 1163633 mRNA sequence	NA	coding protein	psRNATarget