ncRNA ID | novel_zma_miR11790 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr6:136111794-136112019 [+] |
Reference genome | RefGen_v4 |
Source | SRR5100255 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAGGACACAGCCAGUGGAAAUAAC - 24 |
Stem-loop(if miRNA) |
----AA    ACA             A     -     -C              U    CC   AU   -U    CC   C     A     CAC     A -      C      U       GGAC   GCCAGUGGAAAUA CAUUU CACUG  GGUUCACUUAACAC ACCG  AGU  AAA  AGCU  UUU CACUG UGGUU   UUAAG G AACCGC AGUGGA C       ||||   ||||||||||||| ||||| |||||  |||||||||||||| ||||  |||  |||  ||||  ||| ||||| |||||   ||||| | |||||| |||||| A       CUUG   CGGUCACCUUUAU GUAAA GUGAC  CCAAGUGAAUUGUG UGGC  UCA  UUU  UCGA  AAA GUGAC GCCAA   AAUUC C UUGGUG UCACCU U AAUUCA    --G             A     U     CA              U    UA   CU   UC    -U   U     C     UAA     A G      A      U |
Stem-loop sequence | AAGGACACAGCCAGUGGAAAUAACAUUUCACUGCGGUUCACUUAACACUACCGCCAGUAUAAAUAGCUCCUUUCCACUGAUGGUUCACUUAAGAGAACCGCCAGUGGAUCAUUUCCACUAGUGGUUGCACUUAAAAUAACCGCCAGUGUAAAUAGCUCUUUUUCACUAUCGGUUGUGUUAAGUGAACCACCAGUGUAAAUGAUAUUUCCACUGGCGGUUCACUUAA |