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BaseInfo

ncRNA ID novel_zma_miR11787
Species Zea mays
Class miRNA
Genome position Chr6:125980645-125980714 [+]
Reference genome RefGen_v4
Source SRR5100255
Length 24
Mature sequence(if miRNA) 47 - AUAACUGUCGUAUUUUCGUGGGCC - 70
Stem-loop(if miRNA) --              C  --C             A
  CCCACGAAAAUACG CA   AUUUUCGUCGGUC A
  |||||||||||||| ||   |||||||||||||
  GGGUGCUUUUAUGC GU   UAAAAGCAGCCGG G
CC              U  CAA             G
Stem-loop sequence CCCACGAAAAUACGCCACAUUUUCGUCGGUCAAGGGGCCGACGAAAAUAACUGUCGUAUUUUCGUGGGCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020541648.1
ncRNA:24   CCGGGUGCUUUUAUGCUGUCAAUA   1
  ||||*||||*|||||||||*||||
targets:14   GGCCGACGACAAUACGACACUUAU   37

2.5 PREDICTED: Zea mays extensin-like (LOC103634127), mRNA NA coding protein psRNATarget