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BaseInfo

ncRNA ID	novel_zma_miR11783
Species	Zea mays
Class	miRNA
Genome position	Chr6:111459628-111459710 [+]
Reference genome	RefGen_v4
Source	SRR5100255
Length	24
Mature sequence(if miRNA)	60 - AAUCCUCCUGUGAUCCCCUUGUCA - 83
Stem-loop(if miRNA)	ACCAGGAAUC UG         G  -       -    C   UUA           A  GGGGGAUUG AG AGGAUUG AGGG GAA   G           |  ||||||||| || ||||||| |||| |||   U           U  UCCCCUAGU UC UCCUAAC UCCC CUU   U --------AC GU         G  C       G    C   UAC
Stem-loop sequence	ACCAGGAAUCAUGGGGGGAUUGGAGAGGAUUGAGGGCGAAUUAGUUCAUUUCCCCCUGCAAUCCUCCUGUGAUCCCCUUGUCA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT088155.1	ncRNA:24   ACUGUUCCCCUAGUGUCCUCCUAA   1   |||||||*|||||||=|||||||| targets:1419   UGACAAGUGGAUCACGGGAGGAUU   1442 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0038D09 mRNA, complete cds	NA	coding protein	psRNATarget
XM_020543595.1	ncRNA:24   ACUGUUCCCCUAGUGUCCUCCUAA   1   ||||||*||||||||=|||||||| targets:1463   UGACAAAGGGAUCACGGGAGGAUU   1486 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC109942132 (LOC109942132), mRNA	NA	coding protein	psRNATarget
BT069041.1	ncRNA:24   ACUGUUCCCCUAGUGUCCUCCUAA   1   |||=|||||*||||*||||||||| targets:762   UGAUAAGGGCAUCAAAGGAGGAUU   785 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0145H12 mRNA, complete cds	NA	coding protein	psRNATarget
BT069878.1	ncRNA:24   ACUGUUCCCCUAGUGUCCUCCUAA   1   |||=|||||*||||*||||||||| targets:779   UGAUAAGGGCAUCAAAGGAGGAUU   802 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0307H21 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001245914.1	ncRNA:24   ACUGUUCCCCUAGUGUCCUCCUAA   1   |||=|||||*||||*||||||||| targets:747   UGAUAAGGGCAUCAAAGGAGGAUU   770 Target Full Sequence	2.5	Zea mays hypothetical protein (cl22047_1), mRNA	NA	coding protein	psRNATarget
BT083653.1	ncRNA:24   ACUGUUCCCCUAGUGUCCUCCUAA   1   |||=|||||*||||*||||||||| targets:747   UGAUAAGGGCAUCAAAGGAGGAUU   770 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0025G21 mRNA, complete cds	NA	coding protein	psRNATarget
EU961103.1	ncRNA:24   ACUGUUCCCCUAGUGUCCUCCUAA   1   |||=|||||*||||*||||||||| targets:760   UGAUAAGGGCAUCAAAGGAGGAUU   783 Target Full Sequence	2.5	Zea mays clone 232763 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
BT035892.1	ncRNA:24   ACUGUUCCCCUAGUGUCCUCCUAA   1   |||=|||||*||||*||||||||| targets:1029   UGAUAAGGGCAUCAAAGGAGGAUU   1052 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0087F09 mRNA, complete cds	NA	coding protein	psRNATarget