Search result

BaseInfo

ncRNA ID novel_zma_miR11779
Species Zea mays
Class miRNA
Genome position Chr6:105636785-105636855 [+]
Reference genome RefGen_v4
Source SRR5100255
Length 24
Mature sequence(if miRNA) 1 - UUGCAACUGAAAACCGAACCGAGC - 24
Stem-loop(if miRNA) --UU          A          CCAAAGUU    U
    GCAACUGAAA CCGAACCGAG        UCGA U
    |||||||||| ||||||||||        |||| U
    UGUUGGCUUU GGCUUGGCUU        AGCU A
UUGU          -          -----AUU    U
Stem-loop sequence UUGCAACUGAAAACCGAACCGAGCCAAAGUUUCGAUUUAUUCGAUUAUUCGGUUCGGUUUCGGUUGUUGUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU944602.1
ncRNA:24   CGAGCCAAGCCAAAAGUCAACGUU   1
  *=||*|*||*|||||||||||||=
targets:819   UUUCUGAUCUGUUUUCAGUUGCAG   842

3.0 Zea mays clone 223627 mRNA sequence NA coding protein psRNATarget