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BaseInfo

ncRNA ID novel_zma_miR11777
Species Zea mays
Class miRNA
Genome position Chr6:105259304-105259365 [+]
Reference genome RefGen_v4
Source SRR5100255
Length 24
Mature sequence(if miRNA) 1 - ACCGGAUAGUGAACAGUGGUUGUC - 24
Stem-loop(if miRNA) --ACC         ACA   -          G
     GGAUAGUGA   GUG GUUGUCUGGU C
     |||||||||   ||| ||||||||||
     CCUGUUACU   UAC CAACAGACCA U
CGUGA         -GA   A          C
Stem-loop sequence ACCGGAUAGUGAACAGUGGUUGUCUGGUGCUCACCAGACAACACAUAGUCAUUGUCCAGUGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
HI409990.1
ncRNA:19   GGUGACAAGUGAUAGGCCA   1
  *|||||||||||=||||||
targets:1   GCACUGUUCACUGUCCGGU   19

2.5 Sequence 8115 from Patent EP2074227 NA coding protein psRNATarget
JB170451.1
ncRNA:19   GGUGACAAGUGAUAGGCCA   1
  *|||||||||||=||||||
targets:1   GCACUGUUCACUGUCCGGU   19

2.5 Sequence 8115 from Patent EP2559767 NA coding protein psRNATarget
LQ242120.1
ncRNA:19   GGUGACAAGUGAUAGGCCA   1
  *|||||||||||=||||||
targets:1   GCACUGUUCACUGUCCGGU   19

2.5 Sequence 8115 from Patent EP2985353 NA coding protein psRNATarget