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BaseInfo

ncRNA ID novel_zma_miR11773
Species Zea mays
Class miRNA
Genome position Chr5:60758085-60758138 [+]
Reference genome RefGen_v4
Source SRR5100255
Length 23
Mature sequence(if miRNA) 32 - GACGCUCGGCAAAGAACUCUUUG - 54
Stem-loop(if miRNA) --    UUC                 CC
  AAGA   UUCUUUGUCGAGUGUCG  C
  ||||   |||||||||||||||||
  UUCU   AAGAAACGGCUCGCAGU  A
GU    --C                 UG
Stem-loop sequence AAGAUUCUUCUUUGUCGAGUGUCGCCCAGUUGACGCUCGGCAAAGAACUCUUUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
LQ238823.1
ncRNA:23   GUUUCUCAAGAAACGGCUCGCAG   1
  |||||||*|||||||||||=|||
targets:61   CAAAGAGCUCUUUGCCGAGUGUC   83

2.5 Sequence 4818 from Patent EP2985353 NA coding protein psRNATarget
HI406693.1
ncRNA:23   GUUUCUCAAGAAACGGCUCGCAG   1
  |||||||*|||||||||||=|||
targets:61   CAAAGAGCUCUUUGCCGAGUGUC   83

2.5 Sequence 4818 from Patent EP2074227 NA coding protein psRNATarget
JB167154.1
ncRNA:23   GUUUCUCAAGAAACGGCUCGCAG   1
  |||||||*|||||||||||=|||
targets:61   CAAAGAGCUCUUUGCCGAGUGUC   83

2.5 Sequence 4818 from Patent EP2559767 NA coding protein psRNATarget