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BaseInfo

ncRNA ID novel_zma_miR11769
Species Zea mays
Class miRNA
Genome position Chr10:92517777-92517896 [+]
Reference genome RefGen_v4
Source SRR5100255
Length 23
Mature sequence(if miRNA) 98 - CACAAGAGACACUCGGCAAAGAA - 120
Stem-loop(if miRNA) --          C        C                  CUG             CUUC
  CUUUGCCGAG GUCUCUUG GACACUCGGCAAAGAAGU   CUUUGCCGAGUGC    C
  |||||||||| |||||||| ||||||||||||||||||   |||||||||||||
  GAAACGGCUC CAGAGAAC CUGUGAGCUGUUUCUUCA   GAAAUGGCUCACG    A
AA          A        A                  UAA             ACGG
Stem-loop sequence CUUUGCCGAGCGUCUCUUGCGACACUCGGCAAAGAAGUCUGCUUUGCCGAGUGCCUUCCAGGCAGCACUCGGUAAAGAAUACUUCUUUGUCGAGUGUCACAAGAGACACUCGGCAAAGAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU957132.1
ncRNA:23   AA-GAAACGGCUCACAGAGAACAC   1
  ||-|||||=|||||||||||*|||
targets:1453   UUACUUUGUCGAGUGUCUCUCGUG   1476

2.5 Zea mays clone 1583769 mRNA sequence NA coding protein psRNATarget