Search result

BaseInfo

ncRNA ID	novel_zma_miR11767
Species	Zea mays
Class	miRNA
Genome position	Chr5:4668000-4668049 [-]
Reference genome	RefGen_v4
Source	SRR5100255
Length	24
Mature sequence(if miRNA)	27 - ACCGGACAGUGCACAGUGACUAUC - 50
Stem-loop(if miRNA)	C GUGCACAGUGACUAUC ACCGGA A                C |||||| |                G CGUGGC C                G       - UGUCAGGCCACGUGGU
Stem-loop sequence	ACCGGACAGUGCACAGUGACUAUCCGGUGGUGCACCGGACUGUCCGGUGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT065201.2	ncRNA:24   CUAUCAGUGACACGUGACAGGCCA   1   ||*||*=||||||||||||||||| targets:845   GACAGGUACUGUGCACUGUCCGGU   868 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0032D05 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001349964.1	ncRNA:24   CUAU-CAGUGACACGUGACAGGCCA   1   |||*-||=|||||*||||||||||| targets:2971   GAUCCGUUACUGUUCACUGUCCGGU   2995 Target Full Sequence	2.5	Zea mays uncharacterized LOC100278112 (IDP592), mRNA	NA	coding protein	psRNATarget
EU940845.1	ncRNA:24   CUAUCAGUGACACGUGACAGGCCA   1   ||*|**|||||||||*|||||||| targets:1287   GACAUCCACUGUGCAGUGUCCGGU   1310 Target Full Sequence	2.5	Zea mays clone 1163633 mRNA sequence	NA	coding protein	psRNATarget
JB170451.1	ncRNA:19   AGUGACACGUGACAGGCCA   1   *||||||*||||||||||| targets:1   GCACUGUUCACUGUCCGGU   19 Target Full Sequence	2.5	Sequence 8115 from Patent EP2559767	NA	coding protein	psRNATarget
HI409990.1	ncRNA:19   AGUGACACGUGACAGGCCA   1   *||||||*||||||||||| targets:1   GCACUGUUCACUGUCCGGU   19 Target Full Sequence	2.5	Sequence 8115 from Patent EP2074227	NA	coding protein	psRNATarget
LQ242120.1	ncRNA:19   AGUGACACGUGACAGGCCA   1   *||||||*||||||||||| targets:1   GCACUGUUCACUGUCCGGU   19 Target Full Sequence	2.5	Sequence 8115 from Patent EP2985353	NA	coding protein	psRNATarget