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BaseInfo

ncRNA ID novel_zma_miR11766
Species Zea mays
Class miRNA
Genome position Chr5:11269957-11270013 [-]
Reference genome RefGen_v4
Source SRR5100255
Length 19
Mature sequence(if miRNA) 39 - CAGGGCAUGUUUAGGAACA - 57
Stem-loop(if miRNA) --      A     A    -   UCC  UU
  CAGGGC UGUUU GGAA CAA   CG  C
  |||||| ||||| |||| |||   ||
  GUCCCG ACAAA CCUU GUU   GU  A
AU      A     -    C   -CC  UA
Stem-loop sequence CAGGGCAUGUUUAGGAACAAUCCCGUUCAAUUGCCUUGCUUCCAAACAAGCCCUGUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ087780.1
ncRNA:19   ACAAGGAUUUGUACGGGAC   1
  ||||||*|||||||||||*
targets:38   UGUUCCCAAACAUGCCCUA   56

2.5 TSA: Zea mays contig23426, mRNA sequence NA coding protein psRNATarget