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BaseInfo

ncRNA ID novel_zma_miR11761
Species Zea mays
Class miRNA
Genome position Chr5:18922963-18923109 [-]
Reference genome RefGen_v4
Source SRR5100255
Length 23
Mature sequence(if miRNA) 1 - GUGAAGCACGUAUCGGUUACUGA - 23
Stem-loop(if miRNA) --  -             GG   UG ACU  UG  A  UAC    -   U    C UCUCU      U    UUCU  U
  AG AAUUGGUAUGUGU  UCA  G   CA  GU CU   UGUU UCA UCUU C     GAUGUU CUGG    AG G
  || |||||||||||||  |||  |   ||  || ||   |||| ||| |||| |     |||||| ||||    ||
  UC UUGGCUAUGCACG  AGU  U   GU  UA GA   ACAA AGU AGAA G     CUACAG GACC    UC A
AG  A             -A   GU ---  CU  -  UAU    U   C    U ----U      U    UUUU  C
Stem-loop sequence AGAAUUGGUAUGUGUGGUCAUGGACUCAUGGUACUUACUGUUUCAUUCUUCCUCUCUGAUGUUUCUGGUUCUAGUGACCUUUUUCCAGUGACAUCUGUAAGACUGAUAACAUAUAGAUUCUGUUGUGAAGCACGUAUCGGUUACUGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ084210.1
ncRNA:23   AGUCAUUGGCUAUGCACGAAGUG   1
  |||||||||||||||||||||||
targets:134   UCAGUAACCGAUACGUGCUUCAC   156

0.0 TSA: Zea mays contig19854, mRNA sequence NA coding protein psRNATarget
EZ089725.1
ncRNA:23   AGUCAUUGGCUAUGCACGAAGUG   1
  ||||||||||||||*||||||||
targets:14   UCAGUAACCGAUACAUGCUUCAC   36

1.5 TSA: Zea mays contig25371, mRNA sequence NA coding protein psRNATarget