ncRNA ID | novel_zma_miR11761 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr5:18922963-18923109 [-] |
Reference genome | RefGen_v4 |
Source | SRR5100255 |
Length | 23 |
Mature sequence(if miRNA) | 1 - GUGAAGCACGUAUCGGUUACUGA - 23 |
Stem-loop(if miRNA) |
--  -             GG   UG ACU  UG  A  UAC    -   U    C UCUCU      U    UUCU  U   AG AAUUGGUAUGUGU  UCA  G   CA  GU CU   UGUU UCA UCUU C     GAUGUU CUGG    AG G   || |||||||||||||  |||  |   ||  || ||   |||| ||| |||| |     |||||| ||||    ||   UC UUGGCUAUGCACG  AGU  U   GU  UA GA   ACAA AGU AGAA G     CUACAG GACC    UC A AG  A             -A   GU ---  CU  -  UAU    U   C    U ----U      U    UUUU  C |
Stem-loop sequence | AGAAUUGGUAUGUGUGGUCAUGGACUCAUGGUACUUACUGUUUCAUUCUUCCUCUCUGAUGUUUCUGGUUCUAGUGACCUUUUUCCAGUGACAUCUGUAAGACUGAUAACAUAUAGAUUCUGUUGUGAAGCACGUAUCGGUUACUGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EZ084210.1 |
|
0.0 | TSA: Zea mays contig19854, mRNA sequence | NA | coding protein | psRNATarget | |||||||||
EZ089725.1 |
|
1.5 | TSA: Zea mays contig25371, mRNA sequence | NA | coding protein | psRNATarget |