ncRNA ID | novel_zma_miR11755 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr5:29712285-29712366 [-] |
Reference genome | RefGen_v4 |
Source | SRR5100255 |
Length | 23 |
Mature sequence(if miRNA) | 1 - CGCUAGAUUAUAUAAUUUGGACU - 23 |
Stem-loop(if miRNA) |
--  G                -ACCU         G     G   UU AGAUUAUAUAAUCUGG     AUAAUCUAG UGUUU U   || ||||||||||||||||     ||||||||| |||||   AG UUUAAUAUAUUAGAUC     UAUUAGGUC GUAAA U UC  G                GCAUU         -     U |
Stem-loop sequence | UUGAGAUUAUAUAAUCUGGACCUAUAAUCUAGGUGUUUGUUUAAAUGCUGGAUUAUUUACGCUAGAUUAUAUAAUUUGGACU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_001138194.1 |
|
3.0 | Zea mays Sterile alpha motif (SAM) domain-containing protein (LOC100193026), mRNA | NA | coding protein | psRNATarget | |||||||||
BT035178.1 |
|
3.0 | Zea mays full-length cDNA clone ZM_BFb0043N18 mRNA, complete cds | NA | coding protein | psRNATarget |