Search result

BaseInfo

ncRNA ID novel_zma_miR11755
Species Zea mays
Class miRNA
Genome position Chr5:29712285-29712366 [-]
Reference genome RefGen_v4
Source SRR5100255
Length 23
Mature sequence(if miRNA) 1 - CGCUAGAUUAUAUAAUUUGGACU - 23
Stem-loop(if miRNA) --  G                -ACCU         G     G
  UU AGAUUAUAUAAUCUGG     AUAAUCUAG UGUUU U
  || ||||||||||||||||     ||||||||| |||||
  AG UUUAAUAUAUUAGAUC     UAUUAGGUC GUAAA U
UC  G                GCAUU         -     U
Stem-loop sequence UUGAGAUUAUAUAAUCUGGACCUAUAAUCUAGGUGUUUGUUUAAAUGCUGGAUUAUUUACGCUAGAUUAUAUAAUUUGGACU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001138194.1
ncRNA:23   UC--AGGUUUAAUAUAUUAGAUCGC   1
  ||--|==|=|||||||||||||||*
targets:1287   AGCCUUUAGAUUAUAUAAUCUAGCU   1311

3.0 Zea mays Sterile alpha motif (SAM) domain-containing protein (LOC100193026), mRNA NA coding protein psRNATarget
BT035178.1
ncRNA:23   UC--AGGUUUAAUAUAUUAGAUCGC   1
  ||--|==|=|||||||||||||||*
targets:1287   AGCCUUUAGAUUAUAUAAUCUAGCU   1311

3.0 Zea mays full-length cDNA clone ZM_BFb0043N18 mRNA, complete cds NA coding protein psRNATarget