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BaseInfo

ncRNA ID	novel_zma_miR11752
Species	Zea mays
Class	miRNA
Genome position	Chr5:34240258-34240386 [-]
Reference genome	RefGen_v4
Source	SRR5100255
Length	21
Mature sequence(if miRNA)	1 - AUUCCAAACAAACACCUCCUA - 21
Stem-loop(if miRNA)	--C                           UC A       U    C                A    GAGGUGUUUGUUUGGGAUUAUAAUCUG  C GAUUAUA AAUC AACAAAUUUUGAACUA G    |||||||||||||||||||||||||||  | ||||||| |||| |||||||||||||||| U    CUCCACAAACAAACCUUAAUAUUAGAU  G CUAAUAU UUAG UUGUUUAAAACUUGAU G AUC                           GA C       U    U                U
Stem-loop sequence	CGAGGUGUUUGUUUGGGAUUAUAAUCUGUCCAGAUUAUAUAAUCCAACAAAUUUUGAACUAAGUGUUAGUUCAAAAUUUGUUUGAUUUUAUAAUCCGAGUAGAUUAUAAUUCCAAACAAACACCUCCUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU948493.1	ncRNA:21   AUCCUCCACAAACAAACCUUA   1   *|||=|||||||||||||=|| targets:235   AAGGGGGUGUUUGUUUGGGAU   255 Target Full Sequence	2.5	Zea mays clone 378933 mRNA sequence	NA	coding protein	psRNATarget
BT062324.1	ncRNA:21   AUCCUCCACAAACAAACCUUA   1   ||||*|||||||||||||=|| targets:861   UAGGUGGUGUUUGUUUGGGAU   881 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0280F21 mRNA, complete cds	NA	coding protein	psRNATarget
EU950437.1	ncRNA:21   AUCCUCCACAAACAAACCUUA   1   *||*|||*||||||||||||* targets:167   GAGCAGGAGUUUGUUUGGAAA   187 Target Full Sequence	3.0	Zea mays clone 491116 mRNA sequence	NA	coding protein	psRNATarget
EU973292.1	ncRNA:21   AUCCUCCACAAACAAACCUUA   1   *||*|||*||||||||||||* targets:396   GAGCAGGAGUUUGUUUGGAAA   416 Target Full Sequence	3.0	Zea mays clone 396267 mRNA sequence	NA	coding protein	psRNATarget
EU956900.1	ncRNA:21   AUCCUCCACAAACAAACCUUA   1   *||*|||*||||||||||||* targets:639   GAGCAGGAGUUUGUUUGGAAA   659 Target Full Sequence	3.0	Zea mays clone 1577000 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
NM_001149635.1	ncRNA:21   AUCCUCCACAAACAAACCUUA   1   *||*|||*||||||||||||* targets:639   GAGCAGGAGUUUGUUUGGAAA   659 Target Full Sequence	3.0	Zea mays putative protein of unknown function (DUF668) domain family protein (LOC100275584), mRNA	NA	coding protein	psRNATarget
XM_020544962.1	ncRNA:21   AUCCUCCACAAACAAACCUUA   1   *||*|||*||||||||||||* targets:836   GAGCAGGAGUUUGUUUGGAAA   856 Target Full Sequence	3.0	PREDICTED: Zea mays putative protein of unknown function (DUF668) domain family protein (LOC100275584), transcript variant X1, mRNA	NA	coding protein	psRNATarget