Search result

BaseInfo

ncRNA ID osa-miRf10769-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 25
Mature sequence(if miRNA) NA - CGUGCGCACGCUUCCCAAACUACUA - NA
Stem-loop(if miRNA)          AC                 UG A         GCGGAGGG    --- GAACCAGCUAGAACGAAGCUUUAGGCUGC
CACCGUUUA  AGUUUGGGAAGUGUGCG  C GAAAACGAG        AGCU   G                             G
|||||||||  |||||||||||||||||  | |||||||||        ||||   |                             U
GUGGCAGAU  UCAAACCCUUCGCACGC  G CUUUUGUUC        UGUU   G                             U
         CA                 GU C         ------AG    AGA GAGUUAGAGAGGGUUUAGAGGAAACUUUC
Stem-loop sequence CACCGUUUAACAGUUUGGGAAGUGUGCGUGCAGAAAACGAGGCGGAGGGAGCUGGAACCAGCUAGAACGAAGCUUUAGGCUGCGUUCUUUCAAAGGAGAUUUGGGAGAGAUUGAGGAGAUUGUGACUUGUUUUCCGUGCGCACGCUUCCCAAACUACUAGACGGUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK288403.1
ncRNA:25   AUCAUCAAACCCUUCGCACGCGUGC   1
  |||||||||||||||||||||||=|
targets:793   UAGUAGUUUGGGAAGCGUGCGCAUG   817

1.5 Oryza sativa Japonica Group cDNA, clone: J090030C24, full insert sequence NA coding protein psRNATarget
AK242330.1
ncRNA:25   AUCAUCAAACCCUUCGCACGCGUGC   1
  ||||||||||||||||||||||=||
targets:2130   UAGUAGUUUGGGAAGCGUGCGCGCG   2154

1.5 Oryza sativa Japonica Group cDNA, clone: J075198H07, full insert sequence NA coding protein psRNATarget
AK241212.1
ncRNA:25   AUCAUCAAACCCUUCGCACGCGUGC   1
  ||*|||*||||||||||||||||||
targets:278   UAAUAGCUUGGGAAGCGUGCGCACG   302

1.0 Oryza sativa Japonica Group cDNA, clone: J065122M15, full insert sequence NA coding protein psRNATarget
AK120763.1
ncRNA:25   AUCAUCAAACCCUUCGCACGCGUGC   1
  |||*||||||**|||||||||||||
targets:1610   UAGCAGUUUGAAAAGCGUGCGCACG   1634

2.0 Oryza sativa Japonica Group cDNA clone:J023007G17, full insert sequence NA coding protein psRNATarget
AK100351.1
ncRNA:25   AUCAUCAAACCCUUCGCACGCGUGC   1
  ||**|||||||*|||||||=|||||
targets:1232   UAACAGUUUGGAAAGCGUGUGCACG   1256

2.5 Oryza sativa Japonica Group cDNA clone:J023083C17, full insert sequence NA coding protein psRNATarget
AK288219.1
ncRNA:25   AUCAU-CAAACCCUUCGCACGCGUGC   1
  *|*||-|||||**|||||||||||||
targets:241   AAAUACGUUUGAAAAGCGUGCGCACG   266

2.0 Oryza sativa Japonica Group cDNA, clone: J090011I18, full insert sequence NA coding protein psRNATarget