ncRNA ID | osa-miRf10769-npr |
Species | Oryza sativa |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 25 |
Mature sequence(if miRNA) | NA - CGUGCGCACGCUUCCCAAACUACUA - NA |
Stem-loop(if miRNA) |
         AC                 UG A         GCGGAGGG    --- GAACCAGCUAGAACGAAGCUUUAGGCUGC CACCGUUUA  AGUUUGGGAAGUGUGCG  C GAAAACGAG        AGCU   G                             G |||||||||  |||||||||||||||||  | |||||||||        ||||   |                             U GUGGCAGAU  UCAAACCCUUCGCACGC  G CUUUUGUUC        UGUU   G                             U          CA                 GU C         ------AG    AGA GAGUUAGAGAGGGUUUAGAGGAAACUUUC |
Stem-loop sequence | CACCGUUUAACAGUUUGGGAAGUGUGCGUGCAGAAAACGAGGCGGAGGGAGCUGGAACCAGCUAGAACGAAGCUUUAGGCUGCGUUCUUUCAAAGGAGAUUUGGGAGAGAUUGAGGAGAUUGUGACUUGUUUUCCGUGCGCACGCUUCCCAAACUACUAGACGGUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK288403.1 |
|
1.5 | Oryza sativa Japonica Group cDNA, clone: J090030C24, full insert sequence | NA | coding protein | psRNATarget | |||||||||
AK242330.1 |
|
1.5 | Oryza sativa Japonica Group cDNA, clone: J075198H07, full insert sequence | NA | coding protein | psRNATarget | |||||||||
AK241212.1 |
|
1.0 | Oryza sativa Japonica Group cDNA, clone: J065122M15, full insert sequence | NA | coding protein | psRNATarget | |||||||||
AK120763.1 |
|
2.0 | Oryza sativa Japonica Group cDNA clone:J023007G17, full insert sequence | NA | coding protein | psRNATarget | |||||||||
AK100351.1 |
|
2.5 | Oryza sativa Japonica Group cDNA clone:J023083C17, full insert sequence | NA | coding protein | psRNATarget | |||||||||
AK288219.1 |
|
2.0 | Oryza sativa Japonica Group cDNA, clone: J090011I18, full insert sequence | NA | coding protein | psRNATarget |