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BaseInfo

ncRNA ID osa-miRf10768-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 21
Mature sequence(if miRNA) NA - AGUUGAGCUCUGGGUGCCAUC - NA
Stem-loop(if miRNA)    AG  UUA         ---           C -AC   --       CCCUGU  UG   -  U
CCU  CC   AGUUGAGCU   CUGGGUGCCAU G   GCC  CGGGACC      GC  GCU CU C
|||  ||   |||||||||   ||||||||||| |   |||  |||||||      ||  ||| || C
GGA  GG   UCAACUCGG   GGCCCAUGGUA C   CGG  GCCCUGG      CG  CGG GA G
   CA  -UG         UCC           C GGU   CC       ---UUU  GU   C  U
Stem-loop sequence CCUAGCCUUAAGUUGAGCUCUGGGUGCCAUCGACGCCCGGGACCCCCUGUGCUGGCUCUUCCGUAGCGGCUGGCUUUGGUCCCGCCGGCUGGCCAUGGUACCCGGCCUGGCUCAACUGUGGACAGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK063041.1
ncRNA:21   CUACCGUGGGUCUCGAGUUGA   1
  *||||||*|||||||||*|||
targets:124   CAUGGCAGCCAGAGCUCUACU   144

2.5 Oryza sativa Japonica Group cDNA clone:001-110-D06, full insert sequence NA coding protein psRNATarget
XM_015793387.1
ncRNA:21   CUACCGUGGGUCUCGAGUUGA   1
  *||||||*|||||||||*|||
targets:131   CAUGGCAGCCAGAGCUCUACU   151

2.5 PREDICTED: Oryza sativa Japonica Group mavicyanin (LOC4344624), mRNA mavicyanin(LOC4344624) coding protein psRNATarget