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BaseInfo

ncRNA ID novel_zma_miR11700
Species Zea mays
Class miRNA
Genome position Chr9:86098582-86098784 [+]
Reference genome RefGen_v4
Source SRR1997865;SRR5451003;SRR5451004
Length 24
Mature sequence(if miRNA) 1 - ACUGGUGACAAGAGAAUUAGAGGU - 24
Stem-loop(if miRNA) --AC               --       GCCUA             --     U   AUUCAAA   A         A             A   AUCUCCAAUUCC
    UGGUGACAAGAGAAU  UAGAGGU     UGAGGGAGAGGCA  UCUCU GGU       AUU AAUAGCAAG GAUUUUCUUCCCU UGU            A
    |||||||||||||||  |||||||     |||||||||||||  ||||| |||       ||| ||||||||| ||||||||||||| |||            U
    ACCACUGUUCUUUUA  AUCUCUA     ACUCCUUCUUCGU  AGAGA CCG       UAA UUAUUGUUU CUAAAGGAGGGGG ACG            U
CCGA               AU       -----             UU     -   --AUAAA   C         A             A   ACCAAAUCACUA
Stem-loop sequence ACUGGUGACAAGAGAAUUAGAGGUGCCUAUGAGGGAGAGGCAUCUCUUGGUAUUCAAAAUUAAAUAGCAAGAGAUUUUCUUCCCUAUGUAUCUCCAAUUCCAUUAUCACUAAACCAGCAAGGGGGAGGAAAUCAUUUGUUAUUCAAUAAAUAGCCAGAGAUUUGCUUCUUCCUCAAUCUCUAUAAUUUUCUUGUCACCAAGCC