ncRNA ID | novel_zma_miR11700 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr9:86098582-86098784 [+] |
Reference genome | RefGen_v4 |
Source | SRR1997865;SRR5451003;SRR5451004 |
Length | 24 |
Mature sequence(if miRNA) | 1 - ACUGGUGACAAGAGAAUUAGAGGU - 24 |
Stem-loop(if miRNA) |
--AC               --       GCCUA             --     U   AUUCAAA   A         A             A   AUCUCCAAUUCC     UGGUGACAAGAGAAU  UAGAGGU     UGAGGGAGAGGCA  UCUCU GGU       AUU AAUAGCAAG GAUUUUCUUCCCU UGU            A     |||||||||||||||  |||||||     |||||||||||||  ||||| |||       ||| ||||||||| ||||||||||||| |||            U     ACCACUGUUCUUUUA  AUCUCUA     ACUCCUUCUUCGU  AGAGA CCG       UAA UUAUUGUUU CUAAAGGAGGGGG ACG            U CCGA               AU       -----             UU     -   --AUAAA   C         A             A   ACCAAAUCACUA |
Stem-loop sequence | ACUGGUGACAAGAGAAUUAGAGGUGCCUAUGAGGGAGAGGCAUCUCUUGGUAUUCAAAAUUAAAUAGCAAGAGAUUUUCUUCCCUAUGUAUCUCCAAUUCCAUUAUCACUAAACCAGCAAGGGGGAGGAAAUCAUUUGUUAUUCAAUAAAUAGCCAGAGAUUUGCUUCUUCCUCAAUCUCUAUAAUUUUCUUGUCACCAAGCC |